Protein Alignment Rtf1 and VIP5

DIOPT Version :10

• Sequence 1: NP_611665.1
• Gene: Rtf1 / 37554
• FlyBaseID: FBgn0034722
• Length: 775
• Species: Drosophila melanogaster
• Sequence 2: NP_176299.1
• Gene: VIP5 / 842395
• AraportID: AT1G61040
• Length: 643
• Species: Arabidopsis thaliana
• Alignment Length: 795
• Identity: 180/795 - (22%)
• Similarity: 312/795 - (39%)
• Gaps: 242/795 - (30%)

  Fly    60 AGAPSSKKKKRQKPS---RDSSSSESNWD--DDSQDERQPARQSPAQTQQEHKPPEQASQPAQLS 119
            ||..:|..:.|..||   |:.|.|:.:.|  |||.::|..|.:.|:.:|...|...:|.:..: :
plant    12 AGRTNSAGRSRHPPSSRRREGSYSDGSSDSRDDSDEDRGYASRKPSGSQVPLKKRLEAEREDR-A 75

  Fly   120 EQEEGEVSDSDSDKSKSNSSSSGSDSSSSSSSSDSEFDDGFDDDLMGDDEDRRRLNGLSEKERET 184
            .:.||...|..||:           ...||..||      |.|||..::|||::|.|::|.:||.
plant    76 ARVEGGYGDGPSDR-----------EGDSSEESD------FGDDLYKNEEDRQKLAGMTEFQREM 123

  Fly   185 EIYKRIEQREIMRTRWEIERKLKLARRGEKN-QEKSKNKGERAKKKKEKREKKARKAREAQAPLP 248
            .:.:|.:                  ::|:|| .||.::|.|..|....|:|.:         |||
plant   124 ILSERAD------------------KKGDKNFTEKLRSKRESEKTPVSKKETQ---------PLP 161

  Fly   249 TQASTSTLLDVEPKPSNEVRSASPLSTPALNRDAASTSAAVASIMPDDAASSAGVSDYFDHKERS 313
            .              |..|||:           |.|...|.|.   |||.:
plant   162 A--------------SRGVRSS-----------ARSADRAAAK---DDALN-------------- 184

  Fly   314 KERKKNVEANKTDDKRSNAMALLKAKREGKAKREEEEAKRMAEKDRDDDKEELDSVSGCKSAVKL 378
                                              |..||||.::|               .|...
plant   185 ----------------------------------ELRAKRMKQQD---------------PAALR 200

  Fly   379 KASEIYSDDSGSSDWDE-EEKPAGKRSRSNSSKASSES---------------EDEEKAPQRPVF 427
            |..:.....|||.|:.. :.||....:.|:||::.|:|               .|::::.
plant   201 KLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDSDSRSQSDDEGSNGGMLDSDDDRSD----- 260

  Fly   428 ITTREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAEI--VGVVETGKIY 490
            :.|.||:.::.:.|.|:.:::..|.||..::.||||:.||.:...|:||:..:  |...:..|.|
plant   261 VPTFEDVKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTY 325

  Fly   491 SLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTENEFNKWNEVCQQSHVQMPTIDLIAIKQND 553
            .|....|::.|.:..|.:....|  :..||:....|.|:.:|....::::.:|||...|:.|:..
plant   326 KLENKTTHKYLNVVWGNETSAARWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEA 390

  Fly   554 IKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYDIAQDLGQQIDELE 618
            |::..::.:..|.|.::::||.....||.|.|.:|..|.||.:.|..:.|     :.|  ::.::
plant   391 IQRTNSFVYSAETVKQMLQEKKSASVRPMNVAAEKDRLRKELEIAQSKND-----EAG--VERIK 448

  Fly   619 NRASELDKRRS------HTLNLISYINDRNRKKNVEDAEKAILEEARANKGLKISDPFTRRITQP 677
            ::..:||..|:      ..|.| :.:|.:||.:|.::|.:.....|....|....|||:||.|:.
plant   449 SKIKQLDASRNKKGVDKKALKL-AEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRS 512

  Fly   678 RMGFKGAKKDEDDMQLAPLPPPPPGKKRPNEAGTSS----------ASVRSTDS----------- 721
            ...:.|..|.:|..:              |||..::          |.|.:|::
plant   513 SNYYNGKNKGKDGEE--------------NEAAVAAAVETNGADAGAGVEATEAALEAAAEAGKL 563

  Fly   722 --------KDYSLYSLHDFDIDLDV--------PLPVNTNSVPKP-------ASKPAETVSKR-- 761
                    :......||:|::.|.:        |..|....:.:.       ..:.||...||
plant   564 IDTRAPIGQGAEHNQLHNFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHG 628

  Fly   762 -SLNLEDYKKKRGLI 775
             :|.:.|||::|||:
plant   629 LTLTVSDYKRRRGLL 643

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rtf1	NP_611665.1	COG5296	<433..677	CDD:227615	67/253 (26%)
		Plus-3	434..534	CDD:460817	27/103 (26%)
VIP5	NP_176299.1	COG5296	70..516	CDD:227615	135/594 (23%)
		Plus3	261..372	CDD:197843	30/110 (27%)