Sequence 1: | NP_001286717.1 | Gene: | Rtf1 / 37554 | FlyBaseID: | FBgn0034722 | Length: | 775 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006234845.1 | Gene: | Rtf1 / 366169 | RGDID: | 1310654 | Length: | 715 | Species: | Rattus norvegicus |
Alignment Length: | 808 | Identity: | 314/808 - (38%) |
---|---|---|---|
Similarity: | 451/808 - (55%) | Gaps: | 175/808 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 KRRTQSLIDSNSSDSDSESETNLESDLMSLAKKR------KKP---QTAAKSSSR-SDSDSDWA- 56
Fly 57 ----NNKAG-APSSKKKKRQKPSRDSSSSESNWDDDSQDERQPARQSPAQTQQEHKPPEQASQPA 116
Fly 117 QLSEQEEGEVSDSDSDKSKSNSSSSGSDSSSSSSSSDSEFDDGFDDDLMGDDEDRRRLNGLSEKE 181
Fly 182 RETEIYKRIEQREIMRTRWEIERKLKLARRGEKNQEKSKNKGERAKKKKEKREKKARKAREAQAP 246
Fly 247 LPTQASTSTLLDVEPKPSNEVRSASPLSTPALNRDAASTSAAVASIMPDDAASSAGVSDYFDHKE 311
Fly 312 RSKERKKNVEANKTDDKRSNAMALLKAKREGKAKREEEEAKRMAEKDRDDDKEELDSVSGCKSAV 376
Fly 377 KLKASEIYSDDSGSSDWDEEEKPAGKRSRSNSSKASSESEDEEKAPQRPVFITTREDLNKLRLSR 441
Fly 442 YKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAEIVGVVETGKIYSLGTTRTNRGLRLKHG 506
Fly 507 TQERVFRLEFISNQEFTENEFNKWNEVCQQSHVQMPTIDLIAIKQNDIKKALNYEFKDEDVDKIV 571
Fly 572 EEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYDIAQDLGQQIDELENRASELDKRRSHTLNLIS 636
Fly 637 YINDRNRKKNVEDAEKAILEEARANKGLKISDPFTRRITQPRMGFKGAKKDEDDMQLA------- 694
Fly 695 -----PLPPPP----PGKKRPNEAGTSSASVRSTDSKDYSLYSLHDFDIDLDVPLPVNTNSVPKP 750
Fly 751 ASK--PA-ETVSKRSLNLEDYKKKRGLI 775 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rtf1 | NP_001286717.1 | Plus3 | 428..535 | CDD:197843 | 68/106 (64%) |
Rtf1 | XP_006234845.1 | COG5296 | 194..628 | CDD:227615 | 175/433 (40%) |
Plus-3 | 364..464 | CDD:397304 | 31/99 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 168 | 1.000 | Domainoid score | I3740 |
eggNOG | 1 | 0.900 | - | - | E1_COG5296 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 345 | 1.000 | Inparanoid score | I2250 |
OMA | 1 | 1.010 | - | - | QHG55546 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003630 | |
OrthoInspector | 1 | 1.000 | - | - | oto97937 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103917 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3500 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.770 |