DRSC/TRiP Functional Genomics Resources

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Protein Alignment Liprin-gamma and kaznb

DIOPT Version :9

Sequence 1:NP_001097414.1 Gene:Liprin-gamma / 37552 FlyBaseID:FBgn0034720 Length:1152 Species:Drosophila melanogaster
Sequence 2:XP_017213738.1 Gene:kaznb / 790937 ZFINID:ZDB-GENE-061215-31 Length:860 Species:Danio rerio


Alignment Length:939 Identity:280/939 - (29%)
Similarity:424/939 - (45%) Gaps:212/939 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 GHLAQAAGPAHNAPSSGSALNAVDKRNANLSEPDQDLPPNLNVNLSPNPSLAL------------ 262
            |.|.||...:.|:.:...|...|::.||...|.|..||...:   :.|.|:||            
Zfish    20 GQLMQATVQSLNSLNDQIAHFMVNRPNAMSHEEDTFLPTERD---TLNQSMALMRHLLMDAQGKI 81

  Fly   263 ---------------GAPHSPT----------SAASAALLLLESCD--GNRNDESRFHHLH---- 296
                           ||..|.:          ||.|..|..|.:|:  |..|::...||.|    
Zfish    82 LKMMEDNKQLAQRIDGAIQSASQEVTNLRSELSATSRRLAELGACNPIGLENNQQNHHHHHHHHH 146

  Fly   297 ---------------------------SAPRPEATMK---LREENDRLNAELLRLRRLLE-LSTD 330
                                       ....|::|:.   ||||..:|..|:..||::.: ||.|
Zfish   147 LHDPSVHHRQKTVVSDLTFQTGMSSLMDFGTPDSTLDKVLLREEVAQLQEEVHLLRQMKDMLSKD 211

  Fly   331 --GAVGG--VDTAPEMEAVASGEGSAAKERIE--RLESELRSVKNQLLTMRLERKKLRTDKSDLL 389
              .:.||  .||.           |||:.:::  ..|.||...|..|..|:.:||:|:.:|:||:
Zfish   212 LEDSHGGCSADTL-----------SAAELKVQLGEKEQELERAKEALQAMKGDRKRLKAEKADLV 265

  Fly   390 GQVKQLCASLQEKEQELRDFIRNYQERVRETETTNAKISGDRD---RERFQLLKQARDEAERSLA 451
            .|::||..:|:.:|::||||||||.:..:|:|.....::.::|   ||::.|.:|.::..|::..
Zfish   266 NQMQQLYTTLESREEQLRDFIRNYDQHRKESEDAVKALAKEKDMLEREKWDLRRQTKEATEQATV 330

  Fly   452 LAQQLSARDLQLQRLQEQLQEARRQLTGCLSDQESLHSFAPLTPPSAASGMLSQMAAASGMGGGL 516
            |..|:..::.:::.|:.:|..|::.|.....|....||.|..:.|.........|.|...:...:
Zfish   331 LRSQIDMKENRVKELEAELTMAKQSLATLTKDVPKRHSLAMPSEPVVNGSQEWVMQADLPLTAAI 395

  Fly   517 AGMRGTTEDSGRGNSLSAFSGSLSGGSGATAGDRNSCSNDSGLRNSSDRESTGGELNFSDGTCDN 581
            ...:.|...|                                  :.:||::.   |..|      
Zfish   396 RQSQQTLYHS----------------------------------HPADRQAA---LRIS------ 417

  Fly   582 GPCITVDPDSISLVSSQNMYQFGTPKERSPTLSPLNSAAYSRSVEQLGSPVDPEGPGNGAISRKF 646
             ||.:..|..||..|:.:       .:||.|.|.:||..: |:.....|..|.|..     .||.
Zfish   418 -PCHSRQPSIISDASAAD-------GDRSSTPSDINSPRH-RTHSLCNSMEDLEDQ-----KRKK 468

  Fly   647 ANASKSGPLGARNGRGGTWGSISRVFARSRNKNKAL------SADGVTEYADYSWNPLTEEGYAE 705
            .....|            .||:||||||.:::.|:|      .:|.|:...    .|...:| .:
Zfish   469 KKEKMS------------LGSLSRVFARGKSQRKSLDPGLFDDSDSVSSQT----QPSLSDG-ED 516

  Fly   706 KLRLLREAS---QLPIDRWRATQVLAWLEVALGMPQYSARCAENVKSGKVLLELNDVELEAGLGL 767
            :|..|::|.   ..|:..|||..|.|||||.:.||.|...|::|||||||||.|:|.:||.|||:
Zfish   517 QLERLQQAELTRSRPMSLWRAGTVQAWLEVVMAMPMYMRACSDNVKSGKVLLGLSDEDLELGLGI 581

  Fly   768 AHPMHRKKLRLAIEEQRRPEMVR-YPLITQLGHTWVATEWLPDIGLPQYAEPFVQSLVDARMLDT 831
            ..||||:|||||||:.|..|..| ......:.|.||:..||.|:|||||::.|...|||.|:|::
Zfish   582 NSPMHRRKLRLAIEDYREAENGRGLSKAADMDHHWVSKSWLSDVGLPQYSQVFHNQLVDGRVLNS 646

  Fly   832 LSKKELEKFLGVTRKFHQASIVHGIHVLRIVKYDRQTLAMRRVQSETVDTDPIVWTNQRFIRWVR 896
            :::::||....:|.|||..||:..|.:|:::.:|::::..||.|.|..|.||:|||:.|.|:|:|
Zfish   647 ITRRDLETVFNITNKFHVTSILSAIQLLQMLNFDKESIQARRTQCENRDLDPVVWTSHRVIKWIR 711

  Fly   897 SIDLGEYADNLKDSGVHGGLVVLEPSFSGDTMATALGIPPSKNIIRRHLNTEFDALILPARATLG 961
            .|||.||||||::||:||.::||:|:||.|:||.||.||.:|::|.|||..|...|:.|||....
Zfish   712 DIDLKEYADNLQNSGIHGAVMVLDPTFSADSMAKALDIPNNKHMIHRHLYEEMKVLLNPARTNQA 776

  Fly   962 QGIR----------SGC-----GVVPLTGPGGLQHYATTDRRSSGN--LRISAWKGSQSSLSKAF 1009
            |..|          |.|     |..|              |::.|.  ||.:........||...
Zfish   777 QDYRKEGTPTHSPSSNCRKTEEGFSP--------------RKNVGKSPLRFNPLVAVSRELSFQG 827

  Fly  1010 RFNSKPHRTGDRSSFGNSTSPTPSYSSSE 1038
            ...|.|.....:.......||...|||.|
Zfish   828 GCGSPPREERIKILQRTKGSPMHGYSSIE 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Liprin-gammaNP_001097414.1 TBPIP <341..437 CDD:284512 33/100 (33%)
SAM_kazrin_repeat1 718..787 CDD:188963 41/68 (60%)
SAM 719..781 CDD:197735 38/61 (62%)
SAM_kazrin_repeat2 796..860 CDD:188966 26/63 (41%)
SAM 805..860 CDD:197735 23/54 (43%)
SAM_kazrin_repeat3 882..953 CDD:188969 40/70 (57%)
SAM 885..>934 CDD:197735 30/48 (63%)
kaznbXP_017213738.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581787
Domainoid 1 1.000 85 1.000 Domainoid score I8134
eggNOG 1 0.900 - - E1_KOG0249
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 334 1.000 Inparanoid score I2397
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D255905at33208
OrthoFinder 1 1.000 - - FOG0006459
OrthoInspector 1 1.000 - - otm24804
orthoMCL 1 0.900 - - OOG6_106939
Panther 1 1.100 - - LDO PTHR12776
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8574
SonicParanoid 1 1.000 - - X4710
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.830

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