Sequence 1: | NP_001097414.1 | Gene: | Liprin-gamma / 37552 | FlyBaseID: | FBgn0034720 | Length: | 1152 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_509768.1 | Gene: | syd-2 / 181255 | WormBaseID: | WBGene00006364 | Length: | 1139 | Species: | Caenorhabditis elegans |
Alignment Length: | 955 | Identity: | 244/955 - (25%) |
---|---|---|---|
Similarity: | 386/955 - (40%) | Gaps: | 229/955 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 203 NSNLIA--AGHLAQA-AGPAHNAPSSGSALNAVDKRNANLSEPDQDLPPNLNVNLSPNPSLA--- 261
Fly 262 ------LGAPHSPTSAASAALLLLES--C--DGNRND--------ESRFHHLHSAPRPEATMKLR 308
Fly 309 EENDRLNAELLR--------------LRRLLELSTD---GAVGGVDTAPEMEA----------VA 346
Fly 347 SGEGSAAKERIERLESELRSVKNQLLTMRLERKKLRTDKSDLLGQV--KQLCASLQEKEQELRDF 409
Fly 410 IRNYQERVRETETTNA--KI--SGDRDRERFQLLKQA-RDEAERSLALAQQL-SARDLQLQR--- 465
Fly 466 ----------LQEQLQEA----------------------------------------------- 473
Fly 474 ---RRQLTGCLSDQESLHSFAP---------LTPPSAA------SGMLSQMAAASGMGGGLAGMR 520
Fly 521 GTTED-----SGRGNSLSAFSGSLSGGSGATAGDRNSCSNDSGLRNSSDRESTGGELNFSDGTCD 580
Fly 581 NGPCITVDPDSISLVSSQNMYQFGTPKERSPTLSPLNSAAYSRSVEQLGSPV------------- 632
Fly 633 ---------------DPEGPGNGAISRKFANASKSGPLGARNGRGGTWGSISRVFARSRNKNKAL 682
Fly 683 SADGVTEYADYSWNPLT-EEG---------YAEKLRLLREA--SQLPIDRWRATQVLAWLEVALG 735
Fly 736 MPQ-YSARCAENVKSGKVLLELNDVELEAGLGLAHPMHRKKLRLAIEEQ------RRPEMVRYPL 793
Fly 794 -ITQLGHTWVATEWLPDIGLPQYAEPFVQSLVDARMLDTLSKKELEKFLGVTRKFHQASIVHGIH 857
Fly 858 VLRIVKYDRQTLAMRRVQSETVDTDPIVWTNQRFIRWVRSIDLGEYADNLKDSGVHGGLVVLEPS 922
Fly 923 FSGDTMATALGIPPSKNIIRRHLNTEFDALILPARATLGQGIRSG 967 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Liprin-gamma | NP_001097414.1 | TBPIP | <341..437 | CDD:284512 | 23/111 (21%) |
SAM_kazrin_repeat1 | 718..787 | CDD:188963 | 31/75 (41%) | ||
SAM | 719..781 | CDD:197735 | 29/62 (47%) | ||
SAM_kazrin_repeat2 | 796..860 | CDD:188966 | 25/63 (40%) | ||
SAM | 805..860 | CDD:197735 | 24/54 (44%) | ||
SAM_kazrin_repeat3 | 882..953 | CDD:188969 | 28/70 (40%) | ||
SAM | 885..>934 | CDD:197735 | 23/48 (48%) | ||
syd-2 | NP_509768.1 | BAR | <323..474 | CDD:299863 | 32/153 (21%) |
Ferritin_like | <667..>728 | CDD:294190 | 11/82 (13%) | ||
SAM_liprin-alpha1,2,3,4_repeat1 | 864..934 | CDD:188961 | 31/69 (45%) | ||
SAM | 864..930 | CDD:197735 | 30/65 (46%) | ||
SAM_liprin-alpha1,2,3,4_repeat2 | 951..1016 | CDD:188964 | 26/64 (41%) | ||
SAM | 959..1015 | CDD:197735 | 25/55 (45%) | ||
SAM_liprin-alpha1,2,3,4_repeat3 | 1036..1107 | CDD:188967 | 28/70 (40%) | ||
SAM | 1039..1109 | CDD:197735 | 28/69 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I6565 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0249 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |