DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KCNG1 and Shawl

DIOPT Version :9

Sequence 1:NP_002228.2 Gene:KCNG1 / 3755 HGNCID:6248 Length:513 Species:Homo sapiens
Sequence 2:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster


Alignment Length:557 Identity:151/557 - (27%)
Similarity:235/557 - (42%) Gaps:177/557 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    60 DRRRRIIINVGGIKYSLPWTTLDEFPLTRLGQL-KACTNFDDILNVCDDYDVTCNEFFFDRNPGA 123
            |...|||:||.||:|.....||.:.|.|||.:| :|..|:|.:|          ||:||||:||.
  Fly     2 DGENRIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVL----------NEYFFDRHPGV 56

Human   124 FGTILTFLRAGKLRLLREMCALSFQEELLYWGIAEDHLDGCCKRRYLQKIEEFAEMVEREEED-- 186
            |..||.:.|.|||....::|...|:|||.:||:..:.::.||...|         .:.|:.::  
  Fly    57 FTQILNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTY---------SIHRDTQNTL 112

Human   187 ---DALDSEGRDSEGPAE-------------GEGRLGRCMRRLRD----MVERPHSGLPGKVFAC 231
               |.||.|   :|.|.|             ..|.| .|.:|::.    |.:.|.|....|:.|.
  Fly   113 AILDKLDIE---NEKPTEEQIARLFGFEEALSNGEL-NCWQRIKPKIWAMFDEPSSSTGAKIVAG 173

Human   232 LSVLFVTVTAVNLSVSTLPSLR------------------------------------------- 253
            :||.|:.|:.::..:.|.|..|                                           
  Fly   174 MSVFFIFVSVISFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPS 238

Human   254 -----------------------------------------------------EEEEQGHCSQMC 265
                                                                 ||:..||..:..
  Fly   239 GSIGPTFRVTNYTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRK 303

Human   266 HN-----------VFIVESVCVGWFSLEFLLRLIQAPSKFAFLRSPLTLIDLVAILPYYITLLVD 319
            |.           .|.||.||..||.:|.::|||.:|:.:.|::||:.:||..|.|.:|..::  
  Fly   304 HGWIETYGQPHEAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVM-- 366

Human   320 GAAAGRRKPGAGNSYLDKVGLVLRVLRALRILYVMRLARHSLGLQTLGLTARRCTREFGLLLLFL 384
                  ::.|.....|:...:|       ||:.:.:|.|||.||:.|..|.:...:|..||:.||
  Fly   367 ------QRMGEYTGLLEAFSIV-------RIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFL 418

Human   385 CVAIALFAPLLYVIENEMADSP--EFTSIPACYWWAVITMTTVGYGDMVPRSTPGQVVALSSILS 447
            .:.|..||.|.|..| ::.|:|  :|.|||...|||::|||||||||:.|::.||..|.....|:
  Fly   419 VLGIVFFASLAYYAE-KLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALA 482

Human   448 GILLMAFPVT------SIFHTFSRSYLELKQEQERVM 478
            |:|.:|.||.      |:|::.:::..:|.:::.||:
  Fly   483 GVLTIALPVPVIVSNFSMFYSHTQARSKLPKKRRRVL 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNG1NP_002228.2 BTB_POZ_KCNG1_2 60..173 CDD:349728 45/113 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..204 7/37 (19%)
Ion_trans 227..471 CDD:395416 88/358 (25%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 424..429 4/4 (100%)
ShawlNP_001097131.2 BTB 7..99 CDD:197585 41/101 (41%)
BTB_2 7..97 CDD:280393 40/99 (40%)
Ion_trans 307..506 CDD:278921 74/214 (35%)
Ion_trans_2 <449..499 CDD:285168 22/49 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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