DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gp150 and si:dkey-90m5.4

DIOPT Version :9

Sequence 1:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001038237.1 Gene:si:dkey-90m5.4 / 553466 ZFINID:ZDB-GENE-041014-250 Length:327 Species:Danio rerio


Alignment Length:247 Identity:78/247 - (31%)
Similarity:109/247 - (44%) Gaps:27/247 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 INLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNGTTLSILHLKYNTFNGDLHFGTKD 483
            :.:...:|..|..:....|.|||||.|..|.|:.||.||       :..|||             
Zfish    60 LTIQFTNLTVLTSEHLRAVPLLEELHLPGNKLSSLPADI-------LKDLKY------------- 104

  Fly   484 LQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGM 548
            |..:||:.|.:.::...:|...| |.||.||.|.|..|.||.|....||..:|||.|.|.:....
Zfish   105 LHTIDLTDNELRELPEYVFRHAP-LLNLVLKDNRISNIHPDWFPNNSNLTWLDLSGNQLMKFPMA 168

  Fly   549 LFFKNSELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKL 613
            .......|.|:.|:.| ::.:||. |.|.........|||.:.  |..|..||||...:||.:.|
Zfish   169 QLQNLRHLKVLHLSQN-KIEELPV-GCLDAHTALERLYLDQNK--IQTLDVKAFSGSTNLTHIFL 229

  Fly   614 AWNNINHLPREIFTGLHKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAGNP 665
            ..|.|:.||..:|..|.:|..:|||:|.:..:...|...|....:|:.  ||
Zfish   230 QKNRIDSLPPTVFQELKRLEYVDLSDNRLQFLSPGILDINTSWVELTF--NP 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp150NP_477049.2 LRR_8 317..377 CDD:290566
leucine-rich repeat 343..366 CDD:275380
leucine-rich repeat 367..391 CDD:275380
LRR_RI <374..619 CDD:238064 63/199 (32%)
LRR_8 390..450 CDD:290566 10/30 (33%)
leucine-rich repeat 393..415 CDD:275380
leucine-rich repeat 416..439 CDD:275380 3/19 (16%)
leucine-rich repeat 440..483 CDD:275380 14/42 (33%)
leucine-rich repeat 463..481 CDD:275380 3/17 (18%)
LRR_8 484..542 CDD:290566 23/57 (40%)
leucine-rich repeat 484..507 CDD:275380 5/22 (23%)
leucine-rich repeat 508..531 CDD:275380 11/22 (50%)
leucine-rich repeat 532..569 CDD:275380 10/36 (28%)
leucine-rich repeat 556..583 CDD:275380 8/26 (31%)
leucine-rich repeat 570..607 CDD:275380 13/36 (36%)
LRR_RI <586..745 CDD:238064 28/80 (35%)
LRR_8 606..666 CDD:290566 19/60 (32%)
leucine-rich repeat 608..631 CDD:275380 9/22 (41%)
leucine-rich repeat 632..655 CDD:275380 7/22 (32%)
leucine-rich repeat 656..674 CDD:275380 3/10 (30%)
leucine-rich repeat 733..745 CDD:275378
si:dkey-90m5.4NP_001038237.1 LRR_8 55..115 CDD:404697 22/74 (30%)
leucine-rich repeat 57..80 CDD:275380 3/19 (16%)
leucine-rich repeat 81..104 CDD:275380 12/29 (41%)
PPP1R42 102..279 CDD:411060 61/196 (31%)
leucine-rich repeat 105..126 CDD:275380 5/20 (25%)
leucine-rich repeat 128..151 CDD:275380 11/22 (50%)
leucine-rich repeat 152..175 CDD:275380 6/22 (27%)
leucine-rich repeat 176..199 CDD:275380 8/24 (33%)
leucine-rich repeat 200..223 CDD:275380 9/24 (38%)
leucine-rich repeat 224..247 CDD:275380 9/22 (41%)
leucine-rich repeat 248..271 CDD:275380 7/22 (32%)
TPKR_C2 278..319 CDD:417692 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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