DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gp150 and alrm

DIOPT Version :9

Sequence 1:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_651393.1 Gene:alrm / 43074 FlyBaseID:FBgn0039332 Length:471 Species:Drosophila melanogaster


Alignment Length:526 Identity:121/526 - (23%)
Similarity:210/526 - (39%) Gaps:97/526 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 LTDVGLAIINPDTF------VGNKKLRMLTISGN-------DLSVMSSIHYLLKSSSI---EELD 396
            |..:.:.:|.|.::      .|:.:||.|.:..:       ::.:..|.:.:|..:.|   ..|.
  Fly     7 LLSLQVVLILPPSYHLATPSSGSGQLRRLWLQDHCSAGICTNVVIGRSDYVILSQAPIGGTTMLT 71

  Fly   397 FSRNNLMELNPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNGT 461
            |..:::.::....|....::..:.:...||:...:..||..:.|..|.|.||.|.::|::||.|.
  Fly    72 FLNSSIAKIPHLLFDTFPDLQVLRMENCSLETFEKPQFEGASNLMSLFLGYNRLKDIPKNIFLGA 136

  Fly   462 -TLSILHLKYNTF----NGDLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKI 521
             .|:.|||:.|..    |...| ..|::::|.|:.|.:.|:...:|..|..|.:|||.||.:..:
  Fly   137 DNLATLHLQGNQLKQLGNHSFH-ALKEVKELSLAENQLEQISLGVFSGMRKLMDLNLAGNRLDAL 200

  Fly   522 QPDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQLPTDG--FLSYSGEFTV 584
            ....|....||..::|:.|.         |...|.::::|  .|..:||...|  |...:..||:
  Fly   201 PRGVFDRNLNLTKLNLARNR---------FTAFESELLKL--QPVFTQLDISGNIFQELTLNFTM 254

  Fly   585 YYLDISNCAIGPLGHKAFSTMPHLTTLKLAWNNINHLPREIFTGLHKLIDLDLSNNLITRMDDLI 649
              ||::      :.|..  .:..||               ::..:|   :|||.||.:..|..:.
  Fly   255 --LDVA------IAHSC--DLRRLT---------------VYGVIH---ELDLHNNSLREMPHIP 291

  Fly   650 FMDNGELTKLSLAGNPISRLS---VRLFLPLHQLRCLDVNDCELTTLLSDRDLGAGYKIFDSLRS 711
            ...|  ::.|.|:.||:..|.   :|.|..|.:|........||...|        :|....|:.
  Fly   292 LAAN--VSSLDLSHNPLGNLQGNPLRRFTSLLRLNLSATGAHELPEGL--------FKKQSHLQM 346

  Fly   712 FNASGNLIKKISSEDVKSFKNLRSLDITNNPLKCTPDFQEFISYVTLQMQMTPKRLPVLANLEDD 776
            .:.|||.|..:......|.|.|:......|...|        .::.|.|....||..:  :..:|
  Fly   347 LDISGNSIYSLKITIFDSLKALQYFYFQQNNWNC--------DFLQLLMSSFVKRKDI--SFMED 401

  Fly   777 ATIVQLETLAQAG---W--SSLAHEVCKHAEGSDLLDEKKADSAEAK-----LEKRLKESVKKLN 831
            .|..:|......|   |  |....:.|: :.|||...|......|.|     :||:..:..:.|.
  Fly   402 ITAPELVDDYVDGIACWYESDKQSKKCE-SGGSDAAMELSVVRNEIKTFTELVEKKFVKVYRMLE 465

  Fly   832 EDEAKL 837
            |.:.||
  Fly   466 EMKMKL 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp150NP_477049.2 LRR_8 317..377 CDD:290566 7/41 (17%)
leucine-rich repeat 343..366 CDD:275380 4/23 (17%)
leucine-rich repeat 367..391 CDD:275380 5/30 (17%)
LRR_RI <374..619 CDD:238064 60/261 (23%)
LRR_8 390..450 CDD:290566 13/62 (21%)
leucine-rich repeat 393..415 CDD:275380 3/21 (14%)
leucine-rich repeat 416..439 CDD:275380 4/22 (18%)
leucine-rich repeat 440..483 CDD:275380 17/47 (36%)
leucine-rich repeat 463..481 CDD:275380 7/21 (33%)
LRR_8 484..542 CDD:290566 17/57 (30%)
leucine-rich repeat 484..507 CDD:275380 6/22 (27%)
leucine-rich repeat 508..531 CDD:275380 7/22 (32%)
leucine-rich repeat 532..569 CDD:275380 7/36 (19%)
leucine-rich repeat 556..583 CDD:275380 6/28 (21%)
leucine-rich repeat 570..607 CDD:275380 8/38 (21%)
LRR_RI <586..745 CDD:238064 35/161 (22%)
LRR_8 606..666 CDD:290566 13/59 (22%)
leucine-rich repeat 608..631 CDD:275380 2/22 (9%)
leucine-rich repeat 632..655 CDD:275380 7/22 (32%)
leucine-rich repeat 656..674 CDD:275380 6/20 (30%)
leucine-rich repeat 733..745 CDD:275378 2/11 (18%)
alrmNP_651393.1 LRR_RI 84..354 CDD:238064 80/319 (25%)
LRR_8 91..149 CDD:290566 19/57 (33%)
leucine-rich repeat 91..114 CDD:275380 4/22 (18%)
leucine-rich repeat 115..138 CDD:275380 10/22 (45%)
LRR_8 138..197 CDD:290566 20/59 (34%)
leucine-rich repeat 139..162 CDD:275380 7/23 (30%)
leucine-rich repeat 163..186 CDD:275380 6/22 (27%)
LRR_8 185..243 CDD:290566 17/68 (25%)
leucine-rich repeat 187..210 CDD:275380 7/22 (32%)
leucine-rich repeat 211..283 CDD:275380 23/110 (21%)
leucine-rich repeat 284..319 CDD:275380 9/36 (25%)
LRR_8 318..377 CDD:290566 14/66 (21%)
leucine-rich repeat 320..343 CDD:275380 6/30 (20%)
leucine-rich repeat 344..365 CDD:275380 5/20 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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