DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gp150 and 2mit

DIOPT Version :9

Sequence 1:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001262529.1 Gene:2mit / 41616 FlyBaseID:FBgn0260793 Length:1155 Species:Drosophila melanogaster


Alignment Length:611 Identity:149/611 - (24%)
Similarity:217/611 - (35%) Gaps:183/611 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 IKIAN--CTLEYLHAEAFHGLNEL-YAVNLTDVGLAIINPDTFVGNKKLRMLTISGNDLSVMS-- 381
            :||.|  |.|......|:..|..| .|.:|.|:..:    ......::.:.|  |..|:..:|  
  Fly     2 VKIVNQHCDLGLALLLAWTWLTRLVVAAHLVDIPTS----SRLAAEREEQQL--SRQDVGRLSYQ 60

  Fly   382 SIHYLLKSSSIEELDFSRNNL----------MELNPKAFSHLSNVVYINLSQNSLKKLPEKA--- 433
            |||.:|:..:  |.|..|..|          :|||..|..       :||:...|:......   
  Fly    61 SIHRMLRDEN--EPDSFRGELRYQQKRHKRELELNAPANK-------LNLTHRDLRTFNSTGGQW 116

  Fly   434 ---FEKVTLLEELDLSYNSLTELPRDIFN--------GTTLSILHLKYNTFNGDLHFGTKDLQQL 487
               |:.:|   .:|||.|.|..|..|.||        ..:|.::.|.....|..|.|.|     |
  Fly   117 KGDFQVIT---AMDLSSNQLESLSLDNFNQLRQLDLGNNSLEVIPLSLADTNMSLPFVT-----L 173

  Fly   488 DLSFNSIVQVHHSMF-DKMPGLTNLN------------------------LKGNGIKKIQPDSFL 527
            |||.|...|:..|.| .::|.|.|||                        |..|.|..|..::||
  Fly   174 DLSCNKFSQISTSFFAQRLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFL 238

  Fly   528 TLKNLRHIDLSIN--------------DLDQIS---------GMLFFKNS----ELDVIRLNDNP 565
            .|.||:::|||.|              ||..:|         .|..|..|    |||.    ...
  Fly   239 ALPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDA----SGT 299

  Fly   566 RLSQLP------------TDGFLS--YSGEFTVY----YLDISNCAIGPLGHKAF---------- 602
            .|.|:|            :|.:|.  ..|:...|    |||:|:..|..:...|.          
  Fly   300 GLCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVEDDALGRLELLESLF 364

  Fly   603 -----------STMPHLTTLKLAWNNINHLPREIFTGLHKLIDLDLSNNLITRMDDLIFMDNGEL 656
                       |..|.|..|.|..|.|..||.:.|.||..|..||||||      .|||:....|
  Fly   365 LDRNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNN------RLIFLPPLSL 423

  Fly   657 TK---LSLAGNPISRLSVRLFLPLHQLR--CLDVNDCELTTLLSDRDLGAGYKIFDSLRSFNAS- 715
            .|   |:|..:.:..:|..:...|.|||  .|:.|..:.:.||...:..:..:..|:.:|..|| 
  Fly   424 PKLLTLNLESSGVESVSQSIVHTLPQLRDLLLEDNPIKCSDLLGIAEWASPCRSVDAGQSNGASV 488

  Fly   716 -------------GNLIKKISSEDVKSFKNLRSLDITNNPLKCTPDFQEFISYVTLQMQMTPKRL 767
                         .|..:..||.:.    .:|..:....|..|:      ::..:..:..||:.:
  Fly   489 SGRVDLKTEYLQFHNFYENFSSREC----GIRKPENDTKPPSCS------LTRASATLTTTPRSM 543

  Fly   768 -PVLANLEDDATIVQLETLAQAGWSS 792
             .|..:.|..||...:|..|....:|
  Fly   544 SKVEKSQEAQATATSVEVAAATAATS 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp150NP_477049.2 LRR_8 317..377 CDD:290566 13/57 (23%)
leucine-rich repeat 343..366 CDD:275380 4/23 (17%)
leucine-rich repeat 367..391 CDD:275380 8/25 (32%)
LRR_RI <374..619 CDD:238064 88/361 (24%)
LRR_8 390..450 CDD:290566 17/75 (23%)
leucine-rich repeat 393..415 CDD:275380 8/31 (26%)
leucine-rich repeat 416..439 CDD:275380 4/28 (14%)
leucine-rich repeat 440..483 CDD:275380 15/50 (30%)
leucine-rich repeat 463..481 CDD:275380 5/17 (29%)
LRR_8 484..542 CDD:290566 26/96 (27%)
leucine-rich repeat 484..507 CDD:275380 8/23 (35%)
leucine-rich repeat 508..531 CDD:275380 11/46 (24%)
leucine-rich repeat 532..569 CDD:275380 15/63 (24%)
leucine-rich repeat 556..583 CDD:275380 8/40 (20%)
leucine-rich repeat 570..607 CDD:275380 12/75 (16%)
LRR_RI <586..745 CDD:238064 50/198 (25%)
LRR_8 606..666 CDD:290566 25/62 (40%)
leucine-rich repeat 608..631 CDD:275380 10/22 (45%)
leucine-rich repeat 632..655 CDD:275380 10/22 (45%)
leucine-rich repeat 656..674 CDD:275380 5/20 (25%)
leucine-rich repeat 733..745 CDD:275378 2/11 (18%)
2mitNP_001262529.1 LRR_RI 124..355 CDD:238064 64/242 (26%)
leucine-rich repeat 124..143 CDD:275380 9/21 (43%)
leucine-rich repeat 144..167 CDD:275380 3/22 (14%)
leucine-rich repeat 172..194 CDD:275380 9/26 (35%)
LRR_8 193..253 CDD:290566 18/59 (31%)
leucine-rich repeat 195..218 CDD:275380 4/22 (18%)
leucine-rich repeat 219..242 CDD:275380 7/22 (32%)
LRR_8 241..301 CDD:290566 15/63 (24%)
leucine-rich repeat 243..311 CDD:275380 17/71 (24%)
leucine-rich repeat 312..335 CDD:275380 4/22 (18%)
LRR_8 334..415 CDD:290566 25/86 (29%)
leucine-rich repeat 336..359 CDD:275380 6/22 (27%)
leucine-rich repeat 360..380 CDD:275380 1/19 (5%)
LRR_8 379..460 CDD:290566 32/86 (37%)
LRR_4 379..>415 CDD:289563 18/41 (44%)
leucine-rich repeat 381..404 CDD:275380 10/22 (45%)
leucine-rich repeat 405..449 CDD:275380 16/49 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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