DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gp150 and Lrt

DIOPT Version :9

Sequence 1:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001286640.1 Gene:Lrt / 37342 FlyBaseID:FBgn0034540 Length:830 Species:Drosophila melanogaster


Alignment Length:949 Identity:189/949 - (19%)
Similarity:315/949 - (33%) Gaps:286/949 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 MLNTTVAAGE----------KNSTDTDDSEYYDYDDDYNYFDEETVTISPSPKKAKSNPKLQPIV 195
            :|.|..||.:          .:||.|..|..           ..:||...:|.....:....|.:
  Fly    35 LLCTLAAANDLKDLLEDSTTSSSTSTTSSTI-----------PSSVTSPTTPTAYVVSAAAVPAL 88

  Fly   196 DATITKSKSKSNDQKTKESANDIDSDSQYDYDEGLDDDDDEDDAADDLLTDDEQVVFSEDVPCPR 260
            .|...||||.|.....|.|.....::........:||...|....:...|.:.::....|:|...
  Fly    89 VAGRGKSKSTSGKYVNKSSPRKRKAEQVSSLPLPVDDALMEWKCPNITGTRNAELECGCDLPHTL 153

  Fly   261 FCQCARNVNSY-LVATCSRLDMGIQKFGSDITDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKI 324
            .|    |::.: ::....||  ....:...:.|..:.||    ..|.....|.|:.|..:.   |
  Fly   154 RC----NIDLHGMMLLADRL--RTSPYSISLLDCSLRNV----TFLSDAKIFDNVSLHGLV---I 205

  Fly   325 ANCTLEYLHAEAFHGL-NELYAVNLTDVGLAIINPDTFVGNKKLRMLTISGNDLSVMSSIHYLLK 388
            ::..::.:|..||.|: ..|.|:.|.             ||   .::::..|.||.:        
  Fly   206 SSGEIKRVHKSAFLGIRGPLQALGLP-------------GN---ALMSVPWNALSTL-------- 246

  Fly   389 SSSIEELDFSRNNLMELNPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTEL 453
             |::|.||.:.|.:..|....|..|:::||:.||.|.:..:.::.|..:..||.|.|..|.|.:.
  Fly   247 -SALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDY 310

  Fly   454 P---RDIFNGTTLSILHLKYNTFNGDLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTN---LN 512
            .   |.:....:|..|.|:.|..||.|...|                       :||:.|   ||
  Fly   311 AQSLRSLSQCLSLRQLDLQANNLNGPLSEQT-----------------------LPGMRNLESLN 352

  Fly   513 LKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQLPTDGFLS 577
            |..|.||.||                                                       
  Fly   353 LNRNLIKSIQ------------------------------------------------------- 362

  Fly   578 YSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAWNNINHLPREIFTGLHKLIDLDLSNNLI 642
                                 :||.:....|.:|.|..|.|:.|....|.||..|..||||.|.|
  Fly   363 ---------------------NKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGI 406

  Fly   643 TRMDDLIFMDNGELTKLSLAGNPISRLSVRLFLPLHQLRCLDVNDCELTTLLSDRDLGAGYKIFD 707
            ..:..........||.|.|..|.:..|:..|..||                             .
  Fly   407 VAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPL-----------------------------P 442

  Fly   708 SLRSFNASGNLIKKISSEDVKSFKNLRSLDITNNPLKCTPDFQEFISYVTLQMQM---------T 763
            |||....:||.|..::...:...:.|.||.:..|||.|....:.|..::. :.|:         |
  Fly   443 SLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPFAEWLQ-ESQLHSSLSASCVT 506

  Fly   764 PKRL--------PV------LANLE-DDATIVQ-LETLAQAGWSS----LAHEVCKHA--EGSD- 805
            |.||        ||      :.|:| |:|.|:| |||||:...:|    |:.|:..|.  ..:| 
  Fly   507 PPRLEGAPLLQVPVETLSCDMDNVEKDNANIMQHLETLAKPNQTSPIKDLSEEIILHELHFSTDY 571

  Fly   806 ------LLDEKKADSAEAKLEKRLKESVKKLNEDEAKLLSVLDKSVLDKSRLSSMQKIMKGSVNT 864
                  ||:..|.|        .:.:::....|:.      :::.::|.|.:....|::.|....
  Fly   572 GLILTWLLNLSKKD--------YMCDAIFVYKEEH------INEILIDNSPIHCESKVVNGQNTV 622

  Fly   865 ETAKPEEDADEENLNNGGEDKEDDSSDYDSEE---------DDDDDDEDDDDDNNDDDRFEEAKK 920
            ....|                  |||..:..|         .:...|.:.:...::..|.|.:..
  Fly   623 SVIVP------------------DSSSLEIGESYRFCLVMIQEQKPDSELNIGCSNITRLERSSP 669

  Fly   921 NAKAKADANKAFDTFVNKELKPVLKTDGIQAEEVDMSQETRDKFLLEKLGFDSESEESDEYTEKM 985
            .|...:...:....:...||||.:..|.  .|:..::|...:..:      .|:.:::.:.|   
  Fly   670 GAVPVSRQYQRRPYYNANELKPEVVHDA--GEDYQVNQRRFNSVV------GSQPQQTQQST--- 723

  Fly   986 IFHGELSYDLVVPLIVVSFCLLMIVLSIARVIYVVLRKR 1024
            :.|.....|.:....:....|.::|.|:..:|:...|.|
  Fly   724 LLHSYTVIDSLNKSFLPGLGLGVLVTSVLVLIWGATRIR 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp150NP_477049.2 LRR_8 317..377 CDD:290566 11/60 (18%)
leucine-rich repeat 343..366 CDD:275380 5/22 (23%)
leucine-rich repeat 367..391 CDD:275380 3/23 (13%)
LRR_RI <374..619 CDD:238064 49/250 (20%)
LRR_8 390..450 CDD:290566 19/59 (32%)
leucine-rich repeat 393..415 CDD:275380 7/21 (33%)
leucine-rich repeat 416..439 CDD:275380 6/22 (27%)
leucine-rich repeat 440..483 CDD:275380 15/45 (33%)
leucine-rich repeat 463..481 CDD:275380 7/17 (41%)
LRR_8 484..542 CDD:290566 11/60 (18%)
leucine-rich repeat 484..507 CDD:275380 0/22 (0%)
leucine-rich repeat 508..531 CDD:275380 9/25 (36%)
leucine-rich repeat 532..569 CDD:275380 0/36 (0%)
leucine-rich repeat 556..583 CDD:275380 0/26 (0%)
leucine-rich repeat 570..607 CDD:275380 2/36 (6%)
LRR_RI <586..745 CDD:238064 39/158 (25%)
LRR_8 606..666 CDD:290566 21/59 (36%)
leucine-rich repeat 608..631 CDD:275380 9/22 (41%)
leucine-rich repeat 632..655 CDD:275380 7/22 (32%)
leucine-rich repeat 656..674 CDD:275380 6/17 (35%)
leucine-rich repeat 733..745 CDD:275378 6/11 (55%)
LrtNP_001286640.1 LRR_RI <151..334 CDD:238064 49/220 (22%)
leucine-rich repeat 179..199 CDD:275378 6/23 (26%)
leucine-rich repeat 200..223 CDD:275380 6/25 (24%)
leucine-rich repeat 225..248 CDD:275380 8/47 (17%)
LRR_8 249..307 CDD:290566 18/57 (32%)
leucine-rich repeat 249..272 CDD:275380 7/22 (32%)
LRR_RI <270..479 CDD:238064 71/336 (21%)
leucine-rich repeat 273..296 CDD:275380 6/22 (27%)
leucine-rich repeat 297..322 CDD:275380 7/24 (29%)
LRR_8 322..382 CDD:290566 25/158 (16%)
leucine-rich repeat 323..347 CDD:275380 10/46 (22%)
leucine-rich repeat 348..371 CDD:275380 10/98 (10%)
LRR_8 370..428 CDD:290566 20/57 (35%)
leucine-rich repeat 372..395 CDD:275380 9/22 (41%)
leucine-rich repeat 396..419 CDD:275380 7/22 (32%)
LRR_8 418..478 CDD:290566 19/88 (22%)
leucine-rich repeat 420..443 CDD:275380 9/51 (18%)
leucine-rich repeat 444..467 CDD:275380 5/22 (23%)
LRRCT 476..526 CDD:214507 12/50 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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