DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gp150 and Lrig3

DIOPT Version :10

Sequence 1:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_796126.4 Gene:Lrig3 / 320398 MGIID:2443955 Length:1117 Species:Mus musculus


Alignment Length:977 Identity:187/977 - (19%)
Similarity:283/977 - (28%) Gaps:357/977 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 HKKRTTN-----EREATATELEPLVNDCDTSVEKPQQPNENSLFVLFSITLLCTRSRRGEMARVV 254
            ::::.||     |.|..|.|.|....|.....|..:..|||.|                |.....
Mouse   172 YREQETNQQQVAEEEEEANEEETEEQDSSHVTELEEADNENDL----------------EAEHEQ 220

  Fly   255 EQKIKALRVEKEKFGFEPEAGDVSRAQANSGIDNAWYKEVLELRKKAGEYRNRGWGVEMNPDLFT 319
            :..:|....|:|:  .:.|:|                    .||.|          .|...|.. 
Mouse   221 DADVKEESDEEEE--DDEESG--------------------RLRFK----------TERKDDTV- 252

  Fly   320 KQVELWDQVSRRSSL-SALSLASSVRPITKEEKDKENNKKSS--PTKPRGGRVPGGARPVEANRA 381
              |.|.|..|:|.:: ..|.|:...:...::.::.|..:|..  ..:.|||....|.|.....|.
Mouse   253 --VRLSDVASKRRNIPETLELSKEAKADLQKFEENERQRKQGRFGGRGRGGPYGDGGRGGMQGRG 315

  Fly   382 AL--------------------------PDGLNFSAAARSRKDAI-------------------R 401
            .:                          .||:........::..:                   .
Mouse   316 GMRGRGGAGGRGLGGRNDFHMFGMGGFRGDGVGGRGRINEQRPPLMQMNLGMQQQLRMTPPLQHH 380

  Fly   402 HHLERTTGPDVEEG-ALLPSP----TREKLMPAIPRSKADSP-----QRGSPQKTALSRHGSP-Q 455
            ||..|..||....| .|.|.|    .::.|...:|.....||     |..||.:.:   |..| |
Mouse   381 HHQSRLPGPRSSGGPGLFPDPGTPIAQQPLQMLMPHMSHRSPGPRTQQLNSPPRHS---HAHPNQ 442

  Fly   456 KGSPQKSSPKKMSSKGRSQSVGPAVATDGTAPVVAGGSPKRQIRSGSTVAASTASSAAKTHKKTP 520
            ....|:..||.:       .:.|......::||.....|..|.:....:|             :|
Mouse   443 HQQHQQHHPKNI-------HINPHFRGPSSSPVQVPSMPPVQNQPRPNIA-------------SP 487

  Fly   521 TTATAPVIAQN-QQLGP-------QQPERRPRPTSLSTTNHSRSKSSTLP-TSRLHAPHSSTLTN 576
            ..:..|...|: ...||       |:|.|.|.|.      |.:.:....| ..|....|......
Mouse   488 RLSAPPDFQQHLGNFGPPLRPLPSQEPWRGPPPP------HHQDQDHFFPGEPRFSGQHMFDQPG 546

  Fly   577 ---LTNNNHLPNASPSSSAATMAASMIASTTSSSMPANAATAAARAKLTLATASAKRQSGGARSV 638
               |.||:.||              |......:..|...........|.|.      |:.|    
Mouse   547 PAPLLNNSVLP--------------MSGQGPPNFPPQGGLGGPGFGPLGLG------QNQG---- 587

  Fly   639 KPPTSLASDSSAPSSASSTLRKKQRVATVPEGGGGTVGGRGSGSARSVE---SDKKLPTGTLILM 700
              |.|||...:.|..              |.|..|.||.|...|.....   |.:.:|.|...|:
Mouse   588 --PQSLALQHAGPPG--------------PPGPRGFVGHRQPFSPPQQGPPFSPQHMPFGMQGLL 636

  Fly   701 LLS------------HTRHTQKRKTNHERAILRSH-------------REQFYCWPLRRVACSTY 740
            ...            |.:|.|.|:....:|:|.|.             |:|....|..|.:.|  
Mouse   637 QQPLHHDPQLTHQPLHQQHQQHRQDLPPQALLHSQPPPQHQTHHQHHPRDQHLSQPHFRQSIS-- 699

  Fly   741 CTVVSVTNVLWTCVTSVVSPPLPPVISAHCV--------EDADKESAPTVVPPPEILEQIIKSPP 797
                                      |.|..        :..:..:.|.:.||.. |:||   ||
Mouse   700 --------------------------SGHRQMQSRPQGNQQRNNHARPRMTPPSP-LQQI---PP 734

  Fly   798 EPTRVKSPEQI-IMRSPDPVNWTVPLDTGKTFT-VTQNVREG-----------DPM--------- 840
            :  |..:..:: |..|.:....:||....|..| .|||||:|           .|:         
Mouse   735 Q--RNSNLRELPIATSNNNTCPSVPSGQAKPVTKATQNVRQGPVARSGPAGKVGPLAQGQGSARA 797

  Fly   841 -IRPH-SEIKASTPVEQPPPPPQSAPPELSEQSKMPNTKLEPSS-IKE--------------SED 888
             ::|. .|||.:.|..|....||:  |:..|:::....|:|... ::|              .|.
Mouse   798 PLQPRVPEIKKAQPAAQSSTTPQN--PDEDEETRQYRLKIEEQKRLREEVLRRKELRRQQQAGER 860

  Fly   889 EDDDLPRSKSSVASSVNPTSMAISEPMTVSQPPPPSSQPTAALVKDDAKDDGPAGSGGTQPTVGT 953
            :.:.|.|....:.:...||......|  .:|||    ||..:|:           |.||...   
Mouse   861 KKELLERIGGQLPNQTQPTQNTTQPP--TAQPP----QPVPSLI-----------SNGTPQN--- 905

  Fly   954 ATASAPEPVRYDKPVAGSTLRCLEDPSFESDINSPLANRNVATEVLDKARDRFDRFWGNPNEKPE 1018
                 |.|:                      :|||  ..||.|.:|:.........|..| :||:
Mouse   906 -----PSPI----------------------VNSP--RPNVKTRLLNTKPQAPASGWSGP-QKPQ 940

  Fly  1019 ES 1020
            .:
Mouse   941 ST 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp150NP_477049.2 LRR 341..758 CDD:443914 91/514 (18%)
leucine-rich repeat 343..366 CDD:275380 2/24 (8%)
leucine-rich repeat 367..391 CDD:275380 6/49 (12%)
leucine-rich repeat 393..415 CDD:275380 5/40 (13%)
leucine-rich repeat 416..439 CDD:275380 7/31 (23%)
leucine-rich repeat 440..483 CDD:275380 9/43 (21%)
leucine-rich repeat 463..481 CDD:275380 3/17 (18%)
leucine-rich repeat 484..507 CDD:275380 5/22 (23%)
leucine-rich repeat 508..531 CDD:275380 2/22 (9%)
leucine-rich repeat 532..569 CDD:275380 10/44 (23%)
leucine-rich repeat 556..583 CDD:275380 6/30 (20%)
leucine-rich repeat 570..607 CDD:275380 7/39 (18%)
leucine-rich repeat 608..631 CDD:275380 3/22 (14%)
leucine-rich repeat 632..655 CDD:275380 6/22 (27%)
leucine-rich repeat 656..674 CDD:275380 2/17 (12%)
leucine-rich repeat 733..745 CDD:275378 2/11 (18%)
Lrig3NP_796126.4 LRRNT 46..74 CDD:214470
LRR 1 75..98
leucine-rich repeat 76..99 CDD:275378
LRR 77..421 CDD:443914 52/299 (17%)
LRR 2 99..120
leucine-rich repeat 100..146 CDD:275378
LRR 3 122..143
LRR 4 146..168
leucine-rich repeat 147..168 CDD:275380
leucine-rich repeat 169..192 CDD:275380 5/19 (26%)
LRR 5 169..189 4/16 (25%)
LRR 6 193..214 6/20 (30%)
leucine-rich repeat 194..216 CDD:275380 6/37 (16%)
LRR 7 216..237 3/22 (14%)
leucine-rich repeat 217..240 CDD:275380 5/44 (11%)
LRR 8 240..261 8/33 (24%)
leucine-rich repeat 241..264 CDD:275380 10/35 (29%)
LRR 9 264..285 2/20 (10%)
leucine-rich repeat 265..288 CDD:275380 3/22 (14%)
LRR 10 288..309 5/20 (25%)
leucine-rich repeat 289..312 CDD:275380 6/22 (27%)
LRR 11 312..333 1/20 (5%)
leucine-rich repeat 313..336 CDD:275380 1/22 (5%)
LRR 12 336..357 2/20 (10%)
leucine-rich repeat 337..360 CDD:275380 2/22 (9%)
LRR 13 360..382 0/21 (0%)
leucine-rich repeat 361..385 CDD:275380 2/23 (9%)
LRR 14 387..408 6/20 (30%)
leucine-rich repeat 388..411 CDD:275380 6/22 (27%)
LRR 15 411..432 4/20 (20%)
leucine-rich repeat 412..433 CDD:275380 5/20 (25%)
PCC 416..>494 CDD:188093 18/100 (18%)
Ig_3 498..585 CDD:464046 20/112 (18%)
IgI_LRIG1-like 604..694 CDD:409420 19/89 (21%)
Ig strand A 604..607 CDD:409420 0/2 (0%)
Ig strand A' 611..615 CDD:409420 1/3 (33%)
Ig strand B 618..627 CDD:409420 1/8 (13%)
Ig strand C 633..638 CDD:409420 1/4 (25%)
Ig strand C' 641..643 CDD:409420 0/1 (0%)
Ig strand D 651..655 CDD:409420 1/3 (33%)
Ig strand E 659..666 CDD:409420 1/6 (17%)
Ig strand F 672..680 CDD:409420 0/7 (0%)
Ig strand G 683..694 CDD:409420 3/10 (30%)
I-set 697..784 CDD:400151 24/120 (20%)
Ig strand B 714..718 CDD:409544 0/3 (0%)
Ig strand C 727..731 CDD:409544 1/4 (25%)
Ig strand E 750..754 CDD:409544 0/3 (0%)
Ig strand F 764..769 CDD:409544 1/4 (25%)
Ig strand G 777..780 CDD:409544 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1019..1093
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.