DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gp150 and LRRTM2

DIOPT Version :10

Sequence 1:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_056379.1 Gene:LRRTM2 / 26045 HGNCID:19409 Length:516 Species:Homo sapiens


Alignment Length:431 Identity:99/431 - (22%)
Similarity:162/431 - (37%) Gaps:137/431 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 KYPI---LMGPNFFQNLGLKNVASIKIA---NCTLE----YLHAEAFHGLNELYAVNLTDVGLAI 355
            |:|:   ::...:..::.||.:.::.:|   .|..|    |..::.||.:     .|.||.|   
Human     6 KWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSV-----PNATDKG--- 62

  Fly   356 INPDTFVGNKKLRMLTISGNDLSVMSSIHYLLKSSSIEELDFSRNNLMELNPKAFSHLSNVVYIN 420
                 .:|                               |....|::.||....|:..|.:.:::
Human    63 -----SLG-------------------------------LSLRHNHITELERDQFASFSQLTWLH 91

  Fly   421 LSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNGTTLSILHLKYNTFNGDLHFGTKDLQ 485
            |..|.:..:.|.||:.:..|:||.||.|.:..||    |.|...::                :||
Human    92 LDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP----NTTFTQLI----------------NLQ 136

  Fly   486 QLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLF 550
            .||||||.:..:|..:|..:..|..|:|:.|.::.|....|...::|..:|||.|          
Human   137 NLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTN---------- 191

  Fly   551 FKNSELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAW 615
                           ||..|..:||   :|...:..|.:.:..:..:....|..:..|.||.|.|
Human   192 ---------------RLRSLARNGF---AGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQW 238

  Fly   616 NNINHLPREIFTGLHKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAGNPISRLSVRLFLPLHQL 680
            |.|                    :||...|:    ...|.|.||.|.||.|..:.:.:|..:..|
Human   239 NKI--------------------SNLTCGME----WTWGTLEKLDLTGNEIKAIDLTVFETMPNL 279

  Fly   681 RCLDVNDCELTTLLSDRDLGAGYKIFDSLRSFNA---SGNL 718
            :.|.:::.:|.:|.|        ||.:||||...   ||||
Human   280 KILLMDNNKLNSLDS--------KILNSLRSLTTVGLSGNL 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp150NP_477049.2 LRR 341..758 CDD:443914 89/381 (23%)
leucine-rich repeat 343..366 CDD:275380 5/22 (23%)
leucine-rich repeat 367..391 CDD:275380 0/23 (0%)
leucine-rich repeat 393..415 CDD:275380 5/21 (24%)
leucine-rich repeat 416..439 CDD:275380 5/22 (23%)
leucine-rich repeat 440..483 CDD:275380 10/42 (24%)
leucine-rich repeat 463..481 CDD:275380 0/17 (0%)
leucine-rich repeat 484..507 CDD:275380 10/22 (45%)
leucine-rich repeat 508..531 CDD:275380 6/22 (27%)
leucine-rich repeat 532..569 CDD:275380 7/36 (19%)
leucine-rich repeat 556..583 CDD:275380 6/26 (23%)
leucine-rich repeat 570..607 CDD:275380 6/36 (17%)
leucine-rich repeat 608..631 CDD:275380 7/22 (32%)
leucine-rich repeat 632..655 CDD:275380 3/22 (14%)
leucine-rich repeat 656..674 CDD:275380 7/17 (41%)
leucine-rich repeat 733..745 CDD:275378
LRRTM2NP_056379.1 LRR 56..>312 CDD:443914 87/374 (23%)
LRR 1 63..83 6/50 (12%)
leucine-rich repeat 66..86 CDD:275380 5/19 (26%)
LRR 2 86..107 5/20 (25%)
leucine-rich repeat 87..110 CDD:275380 5/22 (23%)
LRR 3 110..131 10/24 (42%)
leucine-rich repeat 111..134 CDD:275380 10/42 (24%)
LRR 4 134..155 10/20 (50%)
leucine-rich repeat 135..158 CDD:275380 10/22 (45%)
LRR 5 158..179 6/20 (30%)
leucine-rich repeat 159..182 CDD:275380 6/22 (27%)
LRR 6 182..203 10/48 (21%)
leucine-rich repeat 183..206 CDD:275380 11/50 (22%)
LRR 7 206..227 2/20 (10%)
leucine-rich repeat 207..230 CDD:275380 2/22 (9%)
LRR 8 230..251 10/44 (23%)
leucine-rich repeat 231..254 CDD:275380 10/46 (22%)
LRR 9 254..275 8/20 (40%)
leucine-rich repeat 255..278 CDD:275380 8/22 (36%)
LRR 10 278..299 7/28 (25%)
leucine-rich repeat 279..300 CDD:275380 7/28 (25%)
PCC 284..>351 CDD:188093 13/37 (35%)
Involved in DLG4-binding. /evidence=ECO:0000250 513..516
Blue background indicates that the domain is not in the aligned region.

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