DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gp150 and TSKU

DIOPT Version :9

Sequence 1:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001305406.1 Gene:TSKU / 25987 HGNCID:28850 Length:367 Species:Homo sapiens


Alignment Length:348 Identity:88/348 - (25%)
Similarity:141/348 - (40%) Gaps:96/348 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 LTISGNDL-----SVMSSIHYLLKSSSIEELDFSRNNLMELNPKAFSHLSNVVYINLSQNSLKKL 429
            |.:|.|.|     ||::...|    :::..||.|.|.|..::|.|||.|..:..::||.|.|..|
Human    77 LDLSSNRLEMVNESVLAGPGY----TTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGLTAL 137

  Fly   430 PEKAFEKVTLLEELDLSYNSLTELPRDIFNGTTLS---ILH--LKYNTFNGDLHFGTK------D 483
            |.::|.. :.|.:::||:|.|.|:....|  ||.|   .||  |.:|..:..:...|:      .
Human   138 PAESFTS-SPLSDVNLSHNQLREVSVSAF--TTHSQGRALHVDLSHNLIHRLVPHPTRAGLPAPT 199

  Fly   484 LQQLDLSFNSIVQVHHSMFDKMPGLTN-----LNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLD 543
            :|.|:|::|.:    |:    :|.|.:     |:|.||.:..|.|.:|..|..|.|:.|:     
Human   200 IQSLNLAWNRL----HA----VPNLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLA----- 251

  Fly   544 QISGMLFFKNSELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHL 608
                                  .|.:||                     .:.|.|   |..:|.|
Human   252 ----------------------SLQRLP---------------------ELAPSG---FRELPGL 270

  Fly   609 TTLKLAWN-NINHLPREIFTGLHKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAGNPISRLSVR 672
            ..|.|:.| .:|....|:|:||..|.:||||...:..:.:.:.:....|..:|:..:...|..||
Human   271 QVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLLHLPALQSVSVGQDVRCRRLVR 335

  Fly   673 L--------FLPLHQLRCLDVND 687
            .        ..|...|.|:|..|
Human   336 EGTYPRRPGSSPKVALHCVDTRD 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp150NP_477049.2 LRR_8 317..377 CDD:290566 3/6 (50%)
leucine-rich repeat 343..366 CDD:275380
leucine-rich repeat 367..391 CDD:275380 7/25 (28%)
LRR_RI <374..619 CDD:238064 66/266 (25%)
LRR_8 390..450 CDD:290566 21/59 (36%)
leucine-rich repeat 393..415 CDD:275380 10/21 (48%)
leucine-rich repeat 416..439 CDD:275380 7/22 (32%)
leucine-rich repeat 440..483 CDD:275380 15/53 (28%)
leucine-rich repeat 463..481 CDD:275380 5/22 (23%)
LRR_8 484..542 CDD:290566 18/62 (29%)
leucine-rich repeat 484..507 CDD:275380 5/22 (23%)
leucine-rich repeat 508..531 CDD:275380 9/27 (33%)
leucine-rich repeat 532..569 CDD:275380 4/36 (11%)
leucine-rich repeat 556..583 CDD:275380 3/26 (12%)
leucine-rich repeat 570..607 CDD:275380 5/36 (14%)
LRR_RI <586..745 CDD:238064 28/111 (25%)
LRR_8 606..666 CDD:290566 17/60 (28%)
leucine-rich repeat 608..631 CDD:275380 9/23 (39%)
leucine-rich repeat 632..655 CDD:275380 5/22 (23%)
leucine-rich repeat 656..674 CDD:275380 5/25 (20%)
leucine-rich repeat 733..745 CDD:275378
TSKUNP_001305406.1 LRR_RI 52..305 CDD:238064 78/293 (27%)
leucine-rich repeat 76..99 CDD:275380 7/25 (28%)
leucine-rich repeat 100..123 CDD:275380 10/22 (45%)
LRR_8 103..157 CDD:290566 21/54 (39%)
leucine-rich repeat 124..145 CDD:275380 7/21 (33%)
leucine-rich repeat 147..170 CDD:275380 9/24 (38%)
leucine-rich repeat 171..197 CDD:275380 5/25 (20%)
leucine-rich repeat 200..219 CDD:275380 7/26 (27%)
LRR_8 221..279 CDD:290566 21/108 (19%)
leucine-rich repeat 221..244 CDD:275380 8/22 (36%)
leucine-rich repeat 245..269 CDD:275380 9/74 (12%)
LRR_8 268..321 CDD:290566 16/52 (31%)
leucine-rich repeat 270..294 CDD:275380 9/23 (39%)
leucine-rich repeat 295..316 CDD:275380 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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