DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gp150 and lron-5

DIOPT Version :9

Sequence 1:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_497943.2 Gene:lron-5 / 184307 WormBaseID:WBGene00008656 Length:656 Species:Caenorhabditis elegans


Alignment Length:703 Identity:154/703 - (21%)
Similarity:257/703 - (36%) Gaps:204/703 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 CQC-------ARNVNSYLVATCSRLDMGIQKFGSDITDLVVTNVGPKYPILMGPNFFQNLGLKNV 319
            |.|       ..|..|.|:.|.|.|        ..|..|.:.::....|    |:|   |...|:
 Worm    24 CDCDFISHTVVCNRPSLLIRTVSML--------PTIRQLHLNSLNLPQP----PHF---LFHPNL 73

  Fly   320 ASIKIANCTLEYLHAEAFHGLNELYAVNLTDVGLAIINPDTFVGNKKLRMLTISGNDLSVMSSIH 384
            ..::::.|.:..:....|..|..|..::|::..|..:.|......|.||:|.:|.|.||.:..:.
 Worm    74 RVLRMSRCGMHEIPGSTFLPLPGLEVIDLSNNHLETLPPTVLRSLKFLRVLILSNNRLSNLDQLT 138

  Fly   385 YLLKSSSI-EELDFSRNNL-----MELNP---KAFSHLSNVVYINLSQNSLKKLPEKAFE----- 435
            ::|....: |:||.|.|.:     |.:.|   :.|...:.:..:|.:....||||.|...     
 Worm   139 WILAPGVVLEQLDLSGNPIAIATSMTVFPPVRQLFLSDTRMESVNETAIMFKKLPGKCDRDVCRH 203

  Fly   436 ------KVTLLEELDLSYNSLTELPR---DIFNGTT-------------------------LSIL 466
                  .|:::..:|.|.|...|:..   |:|:..|                         |:|.
 Worm   204 IPIHNLNVSIITTIDFSSNRDLEIDSGALDVFSNATYVDLSNTRLPVGFEEWLERKSRVKSLNIS 268

  Fly   467 HLKYNTFNGDLHFGT-----KDLQQLDLS------------------------FNSI-------- 494
            |.:.     .||..|     :.|..||:|                        .:|:        
 Worm   269 HCQL-----PLHEDTWTACGQFLHSLDISGIGAKRLRFSRFCPIRSVFARDNLISSVYIDAVSME 328

  Fly   495 -VQVHHSMFDKMP---------GLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGML 549
             :.:..:||.:.|         .|..|.|..|.:..:.|.:..:..||:|.|:|.|.|.:|....
 Worm   329 SLHLERNMFSEFPIPPPGVELTELHTLGLSHNLMTSLPPHALQSYPNLQHFDVSSNQLSEIDPQA 393

  Fly   550 FFKNSELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLA 614
            |              |.:..    |.:|         ||:|:..:..|.|   ..:|.|..|.|:
 Worm   394 F--------------PSIGL----GLIS---------LDLSSNQLSSLPH---PILPSLLLLDLS 428

  Fly   615 WNNINHLPREIFTGLHKLIDLDLSNN--LITR---MDDLIFMDN-GELTKLSLAGNPISRLSVRL 673
            :|.|:||....||||..|..|.:::|  |.:|   .|...:.|: .|||  ||....||...:..
 Worm   429 FNTISHLDPHFFTGLPMLQQLRIASNPTLFSRCPNRDSPCWSDHLDELT--SLVDLDISNSGLEF 491

  Fly   674 FLPLHQLRCLDVNDCELTTLLSDRDLGAGYKIFDS------LRSFNASGNLIKKISSEDVKSFKN 732
            .|....||.|.      :.:|...::    :|.||      ||:.:...|.::..|  :....::
 Worm   492 SLHWRHLRTLK------SLILRGNEI----RIIDSKSLPENLRTLDLGENRVQFTS--NFSKLEH 544

  Fly   733 LRSLDITNNPLKCTPDFQEFISYVTLQMQMTP-------------KRLPVLANLED--DAT---- 778
            ||.|.:..|||:|.....:.:.::..|.|::.             ..||.||:::.  |.|    
 Worm   545 LRDLRVDQNPLRCDCSLYDIVPHLLNQSQISDPLLYYCFSGSWQYPLLPYLASVKPCVDTTRNFY 609

  Fly   779 IVQLETLAQAGWSSLAHEVCKHAEGSDLLDEKKADSAEAKLEK-RLKESVKKL 830
            .:.:.|..      :|..:.....|..|:..|.||.|....:: .|.||..:|
 Worm   610 SILITTFI------IAFAIVAGLIGGFLVYRKYADRANFVYKRISLMESPVRL 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp150NP_477049.2 LRR_8 317..377 CDD:290566 14/59 (24%)
leucine-rich repeat 343..366 CDD:275380 4/22 (18%)
leucine-rich repeat 367..391 CDD:275380 8/23 (35%)
LRR_RI <374..619 CDD:238064 67/339 (20%)
LRR_8 390..450 CDD:290566 18/79 (23%)
leucine-rich repeat 393..415 CDD:275380 8/29 (28%)
leucine-rich repeat 416..439 CDD:275380 7/33 (21%)
leucine-rich repeat 440..483 CDD:275380 13/75 (17%)
leucine-rich repeat 463..481 CDD:275380 5/17 (29%)
LRR_8 484..542 CDD:290566 19/99 (19%)
leucine-rich repeat 484..507 CDD:275380 8/64 (13%)
leucine-rich repeat 508..531 CDD:275380 5/22 (23%)
leucine-rich repeat 532..569 CDD:275380 9/36 (25%)
leucine-rich repeat 556..583 CDD:275380 3/26 (12%)
leucine-rich repeat 570..607 CDD:275380 7/36 (19%)
LRR_RI <586..745 CDD:238064 49/170 (29%)
LRR_8 606..666 CDD:290566 24/65 (37%)
leucine-rich repeat 608..631 CDD:275380 11/22 (50%)
leucine-rich repeat 632..655 CDD:275380 7/28 (25%)
leucine-rich repeat 656..674 CDD:275380 6/17 (35%)
leucine-rich repeat 733..745 CDD:275378 6/11 (55%)
lron-5NP_497943.2 leucine-rich repeat 51..72 CDD:275380 6/27 (22%)
LRR_8 72..131 CDD:338972 14/58 (24%)
leucine-rich repeat 73..96 CDD:275380 3/22 (14%)
LRR <92..>272 CDD:227223 39/179 (22%)
leucine-rich repeat 97..120 CDD:275380 4/22 (18%)
leucine-rich repeat 121..146 CDD:275380 8/24 (33%)
leucine-rich repeat 147..168 CDD:275380 6/20 (30%)
leucine-rich repeat 169..208 CDD:275380 7/38 (18%)
leucine-rich repeat 209..237 CDD:275380 7/27 (26%)
leucine-rich repeat 238..284 CDD:275380 7/50 (14%)
leucine-rich repeat 327..351 CDD:275380 3/23 (13%)
internalin_A 345..>576 CDD:380193 69/274 (25%)
leucine-rich repeat 352..375 CDD:275380 5/22 (23%)
leucine-rich repeat 376..391 CDD:275380 7/14 (50%)
leucine-rich repeat 401..445 CDD:275380 18/55 (33%)
leucine-rich repeat 446..478 CDD:275380 10/33 (30%)
leucine-rich repeat 479..500 CDD:275380 5/20 (25%)
leucine-rich repeat 501..522 CDD:275380 5/30 (17%)
leucine-rich repeat 523..544 CDD:275380 4/22 (18%)
LRRCT 553..601 CDD:214507 10/47 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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