DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gp150 and lron-1

DIOPT Version :10

Sequence 1:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_510424.4 Gene:lron-1 / 181553 WormBaseID:WBGene00008093 Length:607 Species:Caenorhabditis elegans


Alignment Length:549 Identity:123/549 - (22%)
Similarity:206/549 - (37%) Gaps:175/549 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 VFSEDVPCPRF-----CQCARNVNSYLVATCSRLD-MGIQKFGSDITDLVVTNVGPKYPILMGPN 309
            |:|:   ||..     |.|          |.:|.: :.|...|....|.|:.:            
 Worm    14 VYSQ---CPTLQLQEPCTC----------TSTRYEAVSINCDGGSSLDAVLES------------ 53

  Fly   310 FFQNLGLKN----VASIKIANCTLEYLHAEAFHGLNELYAVNLTDVGLAIINPDTFVGN------ 364
                  |.|    :.|:.|:|..:|.:...||.|. ::..:.|.:.||...:|:||.||      
 Worm    54 ------LSNSPQAIDSLTISNTPIEKMPGYAFQGF-QIKKLFLRNNGLRSFHPNTFTGNLENSLE 111

  Fly   365 --------------------KKLRMLTISGNDLSVMSSIHYLLKSS--SIEELDFSRNNLMELNP 407
                                |:|::|::..|.:..:....:|...|  |:.:||.|.|||..::|
 Worm   112 ELEIRGNYIDGIPQSGVSILKQLKILSLPDNLIEYVQDNAFLSYHSRDSLLKLDLSANNLTAIHP 176

  Fly   408 KAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNGTTLSILHLKYNT 472
            .....|.|:..::|.:|.|.::|.:|.|.:..||:|.|..|.:..:.|                 
 Worm   177 TGLLGLENLSQLSLDKNLLSEIPSQALENIPSLEDLSLGVNRIHTISR----------------- 224

  Fly   473 FNGDLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDL 537
                               ||:         .:|.|.:|:|:.|.|:.|..|||.....|.::.|
 Worm   225 -------------------NSL---------PLPNLKSLSLEVNQIRLIPSDSFSETPLLSYLYL 261

  Fly   538 SINDLDQISGMLFFKNSELDVIRLNDNPRLSQLPTDGFLSYSGEF-------------TVYYLDI 589
            ..|.|..|...:|.....|.|:.:::|..::.:..:|.||.. :|             ::..|::
 Worm   262 GNNLLTSIDASMFLHIGGLKVLSMSNNKDITSIQANGKLSVQ-QFKLCICILAFQHAPSLIRLEL 325

  Fly   590 SNCAIGPLGHKAFSTMPHLTTLKLAWNNINHLPREIFTGLHKLIDLDLSNNLITRMDDLIFMDNG 654
            .:|:|..:..|:...:.|:..:.|:.|.|..:..:.|:.|.:|.:||||.|.|..:||..|....
 Worm   326 FDCSISRIEPKSLQKVQHIQVILLSRNQITRISHDTFSNLPELSELDLSGNSINAVDDFAFSQLP 390

  Fly   655 ELTKLSLAGNPISRLSVRLFLPLHQLRCLDVNDCELTTLLSDRDLGAGYKIFDSLRSFNASGNLI 719
            .||.|.|:.|.:..|...:                               |:|||        :.
 Worm   391 MLTSLDLSSNRLESLPSNV-------------------------------IYDSL--------MQ 416

  Fly   720 KKISSEDVKSFKNLRSLDITNNPLKCTPD 748
            ||.|...       |.|.|.|||.:|..|
 Worm   417 KKTSPVQ-------RKLSIQNNPWRCDKD 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp150NP_477049.2 LRR 341..758 CDD:443914 102/449 (23%)
leucine-rich repeat 343..366 CDD:275380 8/48 (17%)
leucine-rich repeat 367..391 CDD:275380 5/25 (20%)
leucine-rich repeat 393..415 CDD:275380 8/21 (38%)
leucine-rich repeat 416..439 CDD:275380 6/22 (27%)
leucine-rich repeat 440..483 CDD:275380 6/42 (14%)
leucine-rich repeat 463..481 CDD:275380 0/17 (0%)
leucine-rich repeat 484..507 CDD:275380 2/22 (9%)
leucine-rich repeat 508..531 CDD:275380 9/22 (41%)
leucine-rich repeat 532..569 CDD:275380 9/36 (25%)
leucine-rich repeat 556..583 CDD:275380 7/39 (18%)
leucine-rich repeat 570..607 CDD:275380 8/49 (16%)
leucine-rich repeat 608..631 CDD:275380 5/22 (23%)
leucine-rich repeat 632..655 CDD:275380 10/22 (45%)
leucine-rich repeat 656..674 CDD:275380 6/17 (35%)
leucine-rich repeat 733..745 CDD:275378 6/11 (55%)
lron-1NP_510424.4 LRR 83..>400 CDD:443914 85/362 (23%)
leucine-rich repeat 85..109 CDD:275380 8/23 (35%)
leucine-rich repeat 110..133 CDD:275380 0/22 (0%)
leucine-rich repeat 134..157 CDD:275380 4/22 (18%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
leucine-rich repeat 185..208 CDD:275380 6/22 (27%)
leucine-rich repeat 209..231 CDD:275380 8/66 (12%)
leucine-rich repeat 232..255 CDD:275380 9/22 (41%)
leucine-rich repeat 256..279 CDD:275380 6/22 (27%)
leucine-rich repeat 280..319 CDD:275380 7/39 (18%)
leucine-rich repeat 320..343 CDD:275380 4/22 (18%)
leucine-rich repeat 344..367 CDD:275380 5/22 (23%)
leucine-rich repeat 368..391 CDD:275380 10/22 (45%)
leucine-rich repeat 392..410 CDD:275380 6/48 (13%)
leucine-rich repeat 414..435 CDD:275378 10/35 (29%)
LRRCT 431..>472 CDD:214507 4/8 (50%)

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