DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gp150 and Igfals

DIOPT Version :10

Sequence 1:NP_477049.2 Gene:Gp150 / 37549 FlyBaseID:FBgn0013272 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001351825.1 Gene:Igfals / 16005 MGIID:107973 Length:638 Species:Mus musculus


Alignment Length:637 Identity:149/637 - (23%)
Similarity:242/637 - (37%) Gaps:143/637 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 TDDEQVVFSEDVPCPRFCQCA-RNVNSYLVATCSRLDMGIQKFGSDITDLVVTNVGPKYPI---- 304
            ||......:|...||..|.|: .:....|...||..::              |.:....|:    
Mouse    63 TDPGASADAEGPQCPVTCTCSYDDYTDELSVFCSSRNL--------------TQLPDSIPVSTRA 113

  Fly   305 --LMGPNF-------FQN----------------------LGLKN-------------------- 318
              |.|.|.       |||                      |||:|                    
Mouse   114 LWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFR 178

  Fly   319 ----VASIKIANCTLEYLHAEAFHGLNELYAVNLTDVGLAIINPDT-FVGNKKLRMLTISGNDLS 378
                :||:.:.|..|..|....|.||:.|:.:||....|.:: ||| |.|...|..|.::||.|:
Mouse   179 HTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVL-PDTVFQGLGNLHELVLAGNKLT 242

  Fly   379 VMSSIHYLLKSSSIEELDFSRNNLMELNPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEEL 443
            .:... .|.....:.|||.|||.|..:....|.||..:..:.|.:|.:..:..:||..:..|..|
Mouse   243 YLQPA-LLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWL 306

  Fly   444 DLSYNSLTELPRDIFNGTT-LSILHLKYN--------TFNGDLHFGTKDLQQLDLSFNSIVQVHH 499
            |||:|.:..|..|.|.|.. |.:|.|.:|        ||. ||||    |::|.|..|.|.|:..
Mouse   307 DLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFK-DLHF----LEELQLGHNRIRQLGE 366

  Fly   500 SMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDN 564
            ..|:.:..|..|.|..|.|.:::..:|..|.|:..::||.|.|..:...:|              
Mouse   367 KTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVF-------------- 417

  Fly   565 PRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAWNNINHLPREIFTGL 629
                          .|...::.|.:.:..:|.:....|:.:..|..|.|..|:|:.:..:...||
Mouse   418 --------------QGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGL 468

  Fly   630 HKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAGNPISRLSVRLFLPLHQLRCLDVNDCELTTLL 694
            .:|::|||:.|.:|.:...:|...|:|..|.|:.|.::.||..:..||.:...||::...|.|  
Mouse   469 SELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLET-- 531

  Fly   695 SDRDLGAGYKIFDS---LRSFNASGNLIKKISSEDVKSFKNLRSLDITNNPLKCTPDFQEFISYV 756
                  ....:|.|   ||..|...|.::....:     ..|..|.:..||..|:...:....:.
Mouse   532 ------PAEGLFSSLGRLRYLNLRNNSLQTFVPQ-----PGLERLWLDANPWDCSCPLKALRDFA 585

  Fly   757 TLQMQMTPKRLPVLANLEDDATIVQLETLAQAGWSSLAHEVCKHAEGSDLLD 808
            .....:.|:.:..:...:|...:.....:..||.::::        |.||.|
Mouse   586 LQNPGVVPRFVQTVCEGDDCQPVYTYNNITCAGPANVS--------GLDLRD 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp150NP_477049.2 LRR 341..758 CDD:443914 111/429 (26%)
leucine-rich repeat 343..366 CDD:275380 9/23 (39%)
leucine-rich repeat 367..391 CDD:275380 6/23 (26%)
leucine-rich repeat 393..415 CDD:275380 10/21 (48%)
leucine-rich repeat 416..439 CDD:275380 4/22 (18%)
leucine-rich repeat 440..483 CDD:275380 20/51 (39%)
leucine-rich repeat 463..481 CDD:275380 10/25 (40%)
leucine-rich repeat 484..507 CDD:275380 7/22 (32%)
leucine-rich repeat 508..531 CDD:275380 7/22 (32%)
leucine-rich repeat 532..569 CDD:275380 5/36 (14%)
leucine-rich repeat 556..583 CDD:275380 1/26 (4%)
leucine-rich repeat 570..607 CDD:275380 4/36 (11%)
leucine-rich repeat 608..631 CDD:275380 7/22 (32%)
leucine-rich repeat 632..655 CDD:275380 7/22 (32%)
leucine-rich repeat 656..674 CDD:275380 6/17 (35%)
leucine-rich repeat 733..745 CDD:275378 4/11 (36%)
IgfalsNP_001351825.1 LRR 88..457 CDD:443914 100/417 (24%)
leucine-rich repeat 92..110 CDD:275380 4/31 (13%)
leucine-rich repeat 114..134 CDD:275380 6/19 (32%)
leucine-rich repeat 135..158 CDD:275380 3/22 (14%)
leucine-rich repeat 159..182 CDD:275380 0/22 (0%)
leucine-rich repeat 183..206 CDD:275380 8/22 (36%)
leucine-rich repeat 207..230 CDD:275380 9/23 (39%)
leucine-rich repeat 231..254 CDD:275380 6/23 (26%)
leucine-rich repeat 255..278 CDD:275380 10/22 (45%)
leucine-rich repeat 279..302 CDD:275380 4/22 (18%)
leucine-rich repeat 303..326 CDD:275380 10/22 (45%)
leucine-rich repeat 327..350 CDD:275380 8/23 (35%)
leucine-rich repeat 351..374 CDD:275380 7/22 (32%)
leucine-rich repeat 375..396 CDD:275380 6/20 (30%)
leucine-rich repeat 423..446 CDD:275380 3/22 (14%)
LRR_8 445..505 CDD:404697 19/59 (32%)
leucine-rich repeat 447..470 CDD:275380 7/22 (32%)
leucine-rich repeat 471..494 CDD:275380 7/22 (32%)
leucine-rich repeat 495..516 CDD:275380 6/20 (30%)
leucine-rich repeat 519..542 CDD:275380 6/30 (20%)
LRR_8 521..571 CDD:404697 12/62 (19%)
leucine-rich repeat 543..561 CDD:275380 4/22 (18%)
LRRCT 570..613 CDD:214507 5/42 (12%)

Return to query results.
Submit another query.