DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdp and mxra5b

DIOPT Version :9

Sequence 1:NP_001286712.1 Gene:wdp / 37548 FlyBaseID:FBgn0034718 Length:677 Species:Drosophila melanogaster
Sequence 2:XP_017213354.1 Gene:mxra5b / 795448 ZFINID:ZDB-GENE-081104-119 Length:2548 Species:Danio rerio


Alignment Length:887 Identity:158/887 - (17%)
Similarity:280/887 - (31%) Gaps:352/887 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TAWLALFLIVVANATPTPARTPTGCPADCTCSLSQHTH---KPLYHLKCNSTRGLRLTEKTFQST 68
            ::||.|.:::|:....:..     ||..|.||.....|   :.|..:....::.::.....|.:.
Zfish     3 SSWLFLLVLLVSFGLCSGV-----CPRQCACSAPAEVHCTFRALLAVPAGISKQVQRINFGFNTI 62

  Fly    69 VPVHSIDLSHLNLTRLSHLL------DKLPELTSADL--------SHNQL---KDLGHLG-KGLK 115
            ..:  .|.|...|.:|..|:      .|:|:....||        |:|:|   .|....| .|:.
Zfish    63 SQI--TDASFSGLRKLELLMMHGNNVQKIPDGAFQDLVSLQVLKMSYNKLTVITDRTFSGLTGII 125

  Fly   116 RLNLKHNQLTSDKLRKLPQ------HLQVLNLQHNNITHL--------------PLE-LTHMH-- 157
            ||:|.||.::|..    ||      .|::|:|:.|.:..|              |:. |.|:|  
Zfish   126 RLHLDHNHISSIH----PQAFLGLTSLRLLHLEANRLQQLHPHTFSTFSVLRRFPVSTLKHLHIS 186

  Fly   158 ----------------QLHQLELSHNAINCSCQTLEVRNWLVERIVYMEHPVV------------ 194
                            ||..|.|:.|..:|.|:...:::|..      .||.|            
Zfish   187 DNLLQTLSRSVLENTPQLETLLLTGNPWSCDCRMRWLQDWSA------RHPGVMKCKKDRTFTSG 245

  Fly   195 -----CSYPLEFRGRSWLQLKQDEICKKEKYQWFDTEENELMMGDQPAAVSAEREDEEELGKDFL 254
                 |:.|...:....|.|||                   ::...|:.:|..|...||...:.|
Zfish   246 QLCPLCASPKHLKAADMLDLKQ-------------------LVCSGPSIISPGRNISEEDTSELL 291

  Fly   255 PI------VGNPAATAK-----------KVRSPQ--------------------------IPLPS 276
            ||      .||.:.|..           ::..||                          .|:..
Zfish   292 PIDRIKPAFGNVSFTLSDEHGTKVDLICQILQPQDSTTISWNHTKSLQIAANVTLVLDVECPVSR 356

  Fly   277 DQVEGSGDL----SETNMELK----------------------------LPEETVAEPEAAESQL 309
            |..|....|    ||..:.|:                            |....:|.|......|
Zfish   357 DDYESFWRLLAYYSEAPVHLRREIMLRREPALSYRYRQDAEKDGFFYTSLKANVLAHPSWLMQSL 421

  Fly   310 VDA------AASPSV---LEEHIVKDEDEDDEGS-----------------------------GS 336
            :..      :.|.||   |...:..:.||::..|                             .|
Zfish   422 ISIKLNRPYSTSKSVRLILSTQLTANADEENVRSWVMIENDNKTQTSFASVVGGVAEMHCRVQSS 486

  Fly   337 GGGLL--IIPDPSKVK--ITSED---DIDSDGKPEESDVRPLENPENSENPDTVFSNKIGIY--- 391
            |..::  ::|:.||||  .:|.|   .|.|.||   .:::.:|:.::            |:|   
Zfish   487 GNAVIYWMLPNGSKVKSAFSSVDGRVSISSSGK---LNIKTIEHRDS------------GVYYCI 536

  Fly   392 ---EGDQE----EKKPVEEDNIVP------------------VVMTNLDTGLESD-VVTDGPLDS 430
               :||.:    ....:|..|.:|                  ..:|......|.: |:.||    
Zfish   537 AEVDGDVDVLPFRLSVIESSNPLPNQEVGNSLSRFIGQSAFLTCLTKASPDAEINWVLPDG---- 597

  Fly   431 SKESEDILTAKIGKPKDDSSAIYYLLAVIGLIVVGLVLFVAIKRCKYDSN-----AAARDAEAQR 490
                 ::|.||....:             .|:.....|::.:  |:.:.|     .|..:.....
Zfish   598 -----NVLNAKANTSR-------------ALLFPNGTLYIPV--CQLNDNGYYKCVAMNNHGVDV 642

  Fly   491 QTELLDMDKKQLGKPLHKNGHGNGQEHSPLIGEKTKLDEAQIVKKPYENGEAKDGAGQQPLLNGN 555
            .:..|.:.:::|.:||.:         .|:|..::....:..||...|:.|              
Zfish   643 FSTKLTVIRRKLIQPLRQ---------YPIIRPQSAAGVSTKVKAFLEDME-------------- 684

  Fly   556 GSANGGTKEAPET----GEPAAHEYYPITPRYPTPQSPRASKYAQQQQLAEQNNNEPDGAYLPSS 616
             .|:|...|...|    ..|.|..:..|  |:..|...||. ...|:.:..:|..:|.       
Zfish   685 -EASGDISETRLTPTRRRRPNARRFGNI--RHRRPFRNRAG-LPNQRPVNTKNKIDPQ------- 738

  Fly   617 PKSGRYSPVYSPETGRVKIKLTETPKPKTPMLVTRSKSNAGD 658
                :::.:.|    :::.|.:|:.|.....|:..::|::||
Zfish   739 ----KWADLLS----KIRAKTSESNKSLQSGLIDNTESSSGD 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdpNP_001286712.1 LRR_RI <31..176 CDD:238064 47/204 (23%)
leucine-rich repeat 47..70 CDD:275378 2/22 (9%)
LRR_8 71..124 CDD:290566 20/70 (29%)
leucine-rich repeat 73..93 CDD:275378 6/25 (24%)
leucine-rich repeat 94..112 CDD:275378 7/29 (24%)
LRR_8 112..169 CDD:290566 23/95 (24%)
leucine-rich repeat 114..134 CDD:275378 6/19 (32%)
leucine-rich repeat 136..158 CDD:275378 9/54 (17%)
leucine-rich repeat 159..171 CDD:275378 4/11 (36%)
mxra5bXP_017213354.1 leucine-rich repeat 33..51 CDD:275380 2/17 (12%)
LRR_8 50..110 CDD:290566 12/61 (20%)
leucine-rich repeat 52..75 CDD:275380 4/24 (17%)
leucine-rich repeat 76..99 CDD:275380 6/22 (27%)
LRR_8 99..158 CDD:290566 18/62 (29%)
leucine-rich repeat 100..123 CDD:275380 5/22 (23%)
leucine-rich repeat 124..147 CDD:275380 8/26 (31%)
LRR_8 146..213 CDD:290566 13/66 (20%)
leucine-rich repeat 148..179 CDD:275380 6/30 (20%)
leucine-rich repeat 180..203 CDD:275380 3/22 (14%)
LRRCT 212..>258 CDD:214507 9/51 (18%)
IG 472..552 CDD:214652 18/94 (19%)
Ig 477..538 CDD:143165 16/75 (21%)
IG 567..649 CDD:214652 14/105 (13%)
Ig 573..639 CDD:299845 13/89 (15%)
IG_like 1583..1666 CDD:214653
Ig 1592..1656 CDD:299845
I-set 1671..1763 CDD:254352
Ig 1686..1763 CDD:299845
IG 1776..1860 CDD:214652
Ig 1783..1860 CDD:299845
I-set 1875..1959 CDD:254352
IGc2 1882..1949 CDD:197706
IG 1979..2062 CDD:214652
Ig 1979..2053 CDD:299845
I-set 2075..2156 CDD:254352
Ig 2082..2146 CDD:299845
IG 2175..2255 CDD:214652
Ig 2180..2255 CDD:299845
IG_like 2271..2351 CDD:214653
IGc2 2276..2343 CDD:197706
IG 2372..2438 CDD:214652
Ig 2377..2438 CDD:143165
IG 2462..2547 CDD:214652
Ig 2471..2544 CDD:143165
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24369
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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