Sequence 1: | NP_001286712.1 | Gene: | wdp / 37548 | FlyBaseID: | FBgn0034718 | Length: | 677 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001258010.1 | Gene: | Lrrc4b / 308571 | RGDID: | 1307121 | Length: | 709 | Species: | Rattus norvegicus |
Alignment Length: | 708 | Identity: | 139/708 - (19%) |
---|---|---|---|
Similarity: | 227/708 - (32%) | Gaps: | 231/708 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 IVVANATPTPARTPTGCPADCTCSLSQH----THKPLYHLKCN---STRGLRLTEKTFQSTVPVH 72
Fly 73 SIDLSHLNLTRLS-HLLDK--------LPELTSADLSHNQLK----------------------- 105
Fly 106 -----------------DLGHLGKGLKRL------------NLKHNQLTSDKLRKLP-------- 133
Fly 134 -----------------------------QHLQV----------------LNLQHNNITHLPLEL 153
Fly 154 -THMHQLHQLELSHNAINCSCQTLEVRNWLVERIVYMEHP------VVCSYPLEFRGRSWLQLKQ 211
Fly 212 DEI-CKKEKYQWFDTE-ENELMMGDQPAAVSAEREDEEELGKDFLPIVGNPAATAKKVRSPQIPL 274
Fly 275 PSDQVEGSGDLSETNMELK-LPEETVAEPEAAESQLVDAAASPSVLEEHIVKDEDEDDEGSGSGG 338
Fly 339 GLLIIPDPSKVKITSEDDIDSDGKPEESDVRPLENPENSENPDTVFSNKIGIYEGDQ-EEKKPVE 402
Fly 403 EDNIVPVVMTNLDTGLESDV-VTDGPLDSSKESEDIL-TAKIGKPKDDSSAIYYLLAVIGLIVVG 465
Fly 466 LVLFVAIKRCKYDSNAAARDAEAQRQTELLDMDKK-------------------------QLGKP 505
Fly 506 L----HKNGH------------------------GNGQEHSPLI---GEKTKLDEAQI 532 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wdp | NP_001286712.1 | LRR_RI | <31..176 | CDD:238064 | 59/266 (22%) |
leucine-rich repeat | 47..70 | CDD:275378 | 7/25 (28%) | ||
LRR_8 | 71..124 | CDD:290566 | 22/113 (19%) | ||
leucine-rich repeat | 73..93 | CDD:275378 | 8/28 (29%) | ||
leucine-rich repeat | 94..112 | CDD:275378 | 7/57 (12%) | ||
LRR_8 | 112..169 | CDD:290566 | 27/122 (22%) | ||
leucine-rich repeat | 114..134 | CDD:275378 | 9/68 (13%) | ||
leucine-rich repeat | 136..158 | CDD:275378 | 12/38 (32%) | ||
leucine-rich repeat | 159..171 | CDD:275378 | 4/11 (36%) | ||
Lrrc4b | NP_001258010.1 | LRRNT | 59..92 | CDD:214470 | 9/32 (28%) |
LRR | <89..299 | CDD:227223 | 42/213 (20%) | ||
LRR 1 | 89..110 | 6/20 (30%) | |||
leucine-rich repeat | 90..113 | CDD:275380 | 7/22 (32%) | ||
LRR 2 | 113..134 | 6/20 (30%) | |||
leucine-rich repeat | 114..137 | CDD:275380 | 6/22 (27%) | ||
LRR 3 | 137..158 | 4/20 (20%) | |||
leucine-rich repeat | 138..161 | CDD:275380 | 4/22 (18%) | ||
LRR 4 | 161..182 | 0/20 (0%) | |||
leucine-rich repeat | 162..185 | CDD:275380 | 0/22 (0%) | ||
LRR 5 | 185..207 | 7/25 (28%) | |||
leucine-rich repeat | 186..210 | CDD:275380 | 7/27 (26%) | ||
LRR 6 | 210..231 | 5/20 (25%) | |||
leucine-rich repeat | 211..232 | CDD:275380 | 4/20 (20%) | ||
LRR 7 | 232..253 | 0/20 (0%) | |||
leucine-rich repeat | 233..256 | CDD:275380 | 0/22 (0%) | ||
LRR 8 | 256..277 | 3/20 (15%) | |||
leucine-rich repeat | 257..280 | CDD:275380 | 3/22 (14%) | ||
LRR 9 | 280..301 | 9/20 (45%) | |||
leucine-rich repeat | 281..302 | CDD:275380 | 10/20 (50%) | ||
LRRCT | 313..363 | CDD:214507 | 14/54 (26%) | ||
I-set | 366..455 | CDD:400151 | 17/95 (18%) | ||
Ig strand A | 366..369 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 373..376 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 382..389 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 395..400 | CDD:409353 | 1/8 (13%) | ||
Ig strand C' | 403..405 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 414..418 | CDD:409353 | 0/6 (0%) | ||
Ig strand E | 421..425 | CDD:409353 | 2/3 (67%) | ||
Ig strand F | 435..442 | CDD:409353 | 1/6 (17%) | ||
Ig strand G | 445..455 | CDD:409353 | 1/9 (11%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 496..552 | 10/62 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24369 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |