DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdp and SLITRK4

DIOPT Version :10

Sequence 1:NP_611661.1 Gene:wdp / 37548 FlyBaseID:FBgn0034718 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_775101.1 Gene:SLITRK4 / 139065 HGNCID:23502 Length:837 Species:Homo sapiens


Alignment Length:557 Identity:119/557 - (21%)
Similarity:200/557 - (35%) Gaps:187/557 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VVANATPTPARTPTGCPADCTC-------------------SLSQHTHKPL----YHLKCNSTRG 57
            :|:..|..|..||  |||.|.|                   |:|:...|||    .|:..||.:.
Human   329 IVSYQTRVPPLTP--CPAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKPLNAKKLHVNGNSIKD 391

  Fly    58 LRLTEKTFQSTVPVHSIDLSHL--------------NLTRLSHL------LDKL-PELTSA---- 97
            :.:::.|     ....:||.||              |||.|..|      :::| ||:.|.    
Human   392 VDVSDFT-----DFEGLDLLHLGSNQITVIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNL 451

  Fly    98 ---DLSHNQLKDLGHLGKGLKRLNLKHNQLTSDKLRKLPQH------LQVLNLQHNNITHLPLE- 152
               .|.:|.:|::. .|......||:...|.::.|:.||.:      |..|||::|...:||:. 
Human   452 QYLYLEYNLIKEIS-AGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAPLARLNLRNNKFMYLPVSG 515

  Fly   153 -LTHMHQLHQLELSHNAINCSCQTLEVRNW---LVERIVYMEHPVVCSYPLEFRGRSWLQLKQDE 213
             |..:..|.|::|..|..:|:|..:.::.|   |.:.||..|  :.|..|::|.......||.:.
Human   516 VLDQLQSLTQIDLEGNPWDCTCDLVALKLWVEKLSDGIVVKE--LKCETPVQFANIELKSLKNEI 578

  Fly   214 ICKKEKYQWFDTEENELMMGDQPAAVSAEREDEEELGKDFLPIVG-NPAAT----AKKVRSP--- 270
            :|.|              :.::|:|                |... .||.|    ...:|||   
Human   579 LCPK--------------LLNKPSA----------------PFTSPAPAITFTTPLGPIRSPPGG 613

  Fly   271 QIPL-------------------------------PSDQVEGSG--DLSETNMELKLPEETVAEP 302
            .:||                               |:.:.||.|  |.....::|:..:....:.
Human   614 PVPLSILILSILVVLILTVFVAFCLLVFVLRRNKKPTVKHEGLGNPDCGSMQLQLRKHDHKTNKK 678

  Fly   303 EAAESQLVDAAASPSVLEEHIVKDEDEDDEGSGSGGGLLIIPDPSKVKIT-------SEDDIDSD 360
            :...::    |..|..:|: :.|......:.|.:|   .:..||...|:.       .:|.:..|
Human   679 DGLSTE----AFIPQTIEQ-MSKSHTCGLKESETG---FMFSDPPGQKVVMRNVADKEKDLLHVD 735

  Fly   361 GKPEESDVRPLEN--PENSENPDTVF----------SNKIGI--YEGDQEEKKPVEEDNIVPVVM 411
            .:...|.:..|:.  |....|   ||          .|.||:  :|....||:|.::..      
Human   736 TRKRLSTIDELDELFPSRDSN---VFIQNFLESKKEYNSIGVSGFEIRYPEKQPDKKSK------ 791

  Fly   412 TNLDTGLESDVVTDGPLDSSKESEDI-LTAKIGKPKD 447
            .:|..|..|.:|.:     .::||.. |.||:....|
Human   792 KSLIGGNHSKIVVE-----QRKSEYFELKAKLQSSPD 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdpNP_611661.1 leucine-rich repeat 47..70 CDD:275378 5/26 (19%)
LRR <72..>169 CDD:443914 35/132 (27%)
leucine-rich repeat 73..93 CDD:275378 10/40 (25%)
leucine-rich repeat 94..112 CDD:275378 4/24 (17%)
leucine-rich repeat 114..134 CDD:275378 5/19 (26%)
leucine-rich repeat 136..158 CDD:275378 8/23 (35%)
leucine-rich repeat 159..171 CDD:275378 4/11 (36%)
SLITRK4NP_775101.1 LRR <59..>213 CDD:443914
LRR 1 60..81
leucine-rich repeat 63..84 CDD:275380
LRR 2 84..105
leucine-rich repeat 85..108 CDD:275380
LRR 3 108..129
leucine-rich repeat 109..132 CDD:275380
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275380
LRR 5 156..177
leucine-rich repeat 157..179 CDD:275380
LRR 6 179..200
leucine-rich repeat 180..204 CDD:275380
leucine-rich repeat 205..295 CDD:275380
LRRCT 213..>253 CDD:214507
leucine-rich repeat 296..371 CDD:275380 11/43 (26%)
LRR <358..>531 CDD:443914 43/178 (24%)
leucine-rich repeat 372..402 CDD:275380 7/34 (21%)
LRR 7 378..399 4/25 (16%)
LRR 8 402..423 4/20 (20%)
leucine-rich repeat 403..426 CDD:275380 6/22 (27%)
LRR 9 426..447 5/20 (25%)
leucine-rich repeat 427..450 CDD:275380 6/22 (27%)
LRR 10 450..471 4/21 (19%)
leucine-rich repeat 451..472 CDD:275380 4/21 (19%)
LRR 11 474..495 6/20 (30%)
leucine-rich repeat 475..496 CDD:275380 5/20 (25%)
LRR 12 497..518 7/20 (35%)
leucine-rich repeat 498..522 CDD:275380 8/23 (35%)
PCC 502..>563 CDD:188093 18/62 (29%)
Blue background indicates that the domain is not in the aligned region.

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