DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5819 and Nepn

DIOPT Version :9

Sequence 1:NP_001246458.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster
Sequence 2:XP_006512881.1 Gene:Nepn / 66650 MGIID:1913900 Length:561 Species:Mus musculus


Alignment Length:526 Identity:135/526 - (25%)
Similarity:229/526 - (43%) Gaps:91/526 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLGV-ISSCRAVNCPWPCRCTWVVDSLYA-DCSRRSLQTYPNFDGIP------------VEHLDL 61
            :||: :::..:.|||..|.|    ||:.: .|.|  |...|:  |||            ::||.|
Mouse    57 LLGLSLTNGLSANCPGRCSC----DSMQSVQCYR--LMELPS--GIPSTTKRLYISHSRIQHLQL 113

  Fly    62 SGNKFLEFPTLYADIDSLIYLDLSSNYISSIGAKTLIGFTSLRTLLLANNSIDSWESLSPNEAFK 126
            |     .|..|.| ::..|.|...:..|.:...|||   ::|:||.|..|.:....|..|     
Mouse   114 S-----NFTGLLA-LEDFILLASGTESIENDTFKTL---STLKTLELWKNKLRQVPSALP----- 164

  Fly   127 YAPSLKRLGLDGNRLGSFGNGESFELLTSSSLTDLGLSSCGISSIGGDQMVNQLPNLERLNLANN 191
              .:|:.|.|:.|.:.:. .|..||.|  .:|..|.|.:..|||: ...|::.|.:|:.|.:..|
Mouse   165 --ANLEVLKLNDNAICAL-RGSEFEGL--KNLKVLELKNNLISSL-SPSMLSPLASLQSLMVDGN 223

  Fly   192 QLAQIA---ALPSRTLRVLDLSNCSIKNLSGFFLDAMQNLEALNLSRNTELQFDSLSEDPILTYM 253
            .:..:.   :||.  |:.:.:.|..:..:.|....::|||:.|:.|.|                .
Mouse   224 NIESVVGPLSLPH--LKYMSMENNQLHLIPGNVFTSLQNLQFLSFSGN----------------F 270

  Fly   254 LRKLDVSYCNLDSIELSGLPQ-LTEVRLQGNLLRVVDVNTFANNSMLEVVDLSQNVLRHIGQDAF 317
            |.|:.::           ||: |..::::.|.|:||......:...|..:.||:|.|..|  |..
Mouse   271 LTKIPIN-----------LPKSLLSLKMERNQLKVVRFRDMKHLENLSHLYLSENFLSSI--DGA 322

  Fly   318 AKLKRLKELNLAFNEIARLDRNFIRNNDVLVELNLSRNVLQKLTKIVSNSVRTINMSWCE---IT 379
            .:|..|..|.::.|::..|..   |....|.:|:.|.|.:|::|......:|.:...:.:   ::
Mouse   323 QQLTNLTTLEVSQNQLQMLPP---RLPSRLQKLDCSSNFIQRVTAPEFQDLRDLKHLFLDNNVVS 384

  Fly   380 SIESTALSSLSVIQKLDLSNNLITDMPTFMRSETLQQLNLANCRLTTVRNNTFREFPELADLHLN 444
            ..|:.||...|.:..|.|..||:..:|..: .:||.:|:|....:..:.....|:..:|..|:|.
Mouse   385 LFEAGALQRCSQLSNLALEQNLLLSIPLRL-PKTLARLDLKGNAIQDMAERELRDLKQLQVLNLR 448

  Fly   445 GNRLTSPIPPNYFDGNKFLDQLWLGDNPWICDCHSPLFVDFYDYLTAKPAKIKDRNHLRCAAPAV 509
            .||: |.:.....:|...|..|:|..|||.|.|.   .:...:.|.||...:|..   :|||||.
Mouse   449 NNRI-SALDFKALEGLPRLRHLYLDGNPWNCTCS---LLRAREVLKAKGTDVKGG---QCAAPAE 506

  Fly   510 FYGKLW 515
            ..|:.|
Mouse   507 RQGESW 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5819NP_001246458.1 leucine-rich repeat 56..78 CDD:275380 7/21 (33%)
LRR_RI <58..236 CDD:238064 49/180 (27%)
LRR_8 78..141 CDD:290566 17/62 (27%)
leucine-rich repeat 79..102 CDD:275380 6/22 (27%)
leucine-rich repeat 103..130 CDD:275380 7/26 (27%)
leucine-rich repeat 131..155 CDD:275380 8/23 (35%)
LRR_8 156..214 CDD:290566 15/60 (25%)
leucine-rich repeat 158..182 CDD:275380 8/23 (35%)
LRR_8 202..285 CDD:290566 15/83 (18%)
leucine-rich repeat 204..227 CDD:275380 3/22 (14%)
leucine-rich repeat 254..274 CDD:275380 3/19 (16%)
LRR_8 273..333 CDD:290566 17/60 (28%)
leucine-rich repeat 275..298 CDD:275380 5/22 (23%)
LRR_RI 277..>471 CDD:238064 48/196 (24%)
leucine-rich repeat 299..322 CDD:275380 8/22 (36%)
LRR_8 321..402 CDD:290566 19/83 (23%)
leucine-rich repeat 323..346 CDD:275380 5/22 (23%)
leucine-rich repeat 347..391 CDD:275380 10/46 (22%)
leucine-rich repeat 392..413 CDD:275380 5/20 (25%)
LRR_8 393..448 CDD:290566 14/54 (26%)
leucine-rich repeat 414..437 CDD:275380 4/22 (18%)
LRRCT 471..517 CDD:214507 16/45 (36%)
NepnXP_006512881.1 leucine-rich repeat 101..121 CDD:275380 6/24 (25%)
leucine-rich repeat 122..145 CDD:275380 6/25 (24%)
leucine-rich repeat 146..166 CDD:275380 7/26 (27%)
PRK15370 <148..>367 CDD:185268 64/263 (24%)
leucine-rich repeat 167..190 CDD:275380 8/25 (32%)
leucine-rich repeat 191..214 CDD:275380 8/23 (35%)
leucine-rich repeat 215..236 CDD:275380 4/20 (20%)
leucine-rich repeat 237..260 CDD:275380 3/22 (14%)
leucine-rich repeat 261..305 CDD:275380 13/70 (19%)
PRK15370 <271..>474 CDD:185268 53/220 (24%)
leucine-rich repeat 282..297 CDD:275380 5/14 (36%)
leucine-rich repeat 306..327 CDD:275380 8/22 (36%)
leucine-rich repeat 328..348 CDD:275380 5/22 (23%)
leucine-rich repeat 349..372 CDD:275380 6/22 (27%)
leucine-rich repeat 373..396 CDD:275380 3/22 (14%)
leucine-rich repeat 397..420 CDD:275380 7/23 (30%)
leucine-rich repeat 421..441 CDD:275380 3/19 (16%)
leucine-rich repeat 442..465 CDD:275380 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243556at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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