Sequence 1: | NP_001246458.1 | Gene: | CG5819 / 37547 | FlyBaseID: | FBgn0034717 | Length: | 915 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102659.1 | Gene: | Lingo4 / 499668 | RGDID: | 1562025 | Length: | 618 | Species: | Rattus norvegicus |
Alignment Length: | 528 | Identity: | 139/528 - (26%) |
---|---|---|---|
Similarity: | 198/528 - (37%) | Gaps: | 157/528 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 VLELALLVLGVISSCRAVNCPWPCRCTWVVDSLYADCSRRSLQTYPNFDGIPV--EHLDLSGNKF 66
Fly 67 LEFPT-LYADIDSLIYLDLSSNYISSIGAKTLIGFTSLRTLLLANNSIDSWESLSPNEAFKYAPS 130
Fly 131 LKRLGLDGNRLGSFGNGESFELLTSSSLTDLGLSSCGISSIGGDQMVNQLPNLERLNLANNQLAQ 195
Fly 196 IAALPSRTLRVLDLSNCSIKNLSGFFLDAMQNLEALNLSRNTELQFDSLSEDPILTYMLRKLDVS 260
Fly 261 YCNLDSI---ELSGLPQLTEVRLQGNLLRVVDVNTFANNSMLEVVDLSQNVLRHIGQDAFAKLKR 322
Fly 323 LKELNL-AFNEIARLDRNFIRNNDVLVELNLSRNVLQKLTKIVSNSVRTINMSWCEITSIESTAL 386
Fly 387 SSLSVIQKLDLSNNLITDMPTFMRSE--TLQQLNLANCRLTTVRNNTFREFPELADLHLNGNRLT 449
Fly 450 SPIPPNYFDGNKFLDQLWLGDNPWICDCHSPLFVDF---YDYLTAKPAKIKDRNHLRCAAPAVFY 511
Fly 512 GK-LWEFA 518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5819 | NP_001246458.1 | leucine-rich repeat | 56..78 | CDD:275380 | 7/24 (29%) |
LRR_RI | <58..236 | CDD:238064 | 44/178 (25%) | ||
LRR_8 | 78..141 | CDD:290566 | 17/62 (27%) | ||
leucine-rich repeat | 79..102 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 103..130 | CDD:275380 | 4/26 (15%) | ||
leucine-rich repeat | 131..155 | CDD:275380 | 11/23 (48%) | ||
LRR_8 | 156..214 | CDD:290566 | 11/57 (19%) | ||
leucine-rich repeat | 158..182 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 202..285 | CDD:290566 | 14/85 (16%) | ||
leucine-rich repeat | 204..227 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 254..274 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 273..333 | CDD:290566 | 14/60 (23%) | ||
leucine-rich repeat | 275..298 | CDD:275380 | 3/22 (14%) | ||
LRR_RI | 277..>471 | CDD:238064 | 49/196 (25%) | ||
leucine-rich repeat | 299..322 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 321..402 | CDD:290566 | 24/81 (30%) | ||
leucine-rich repeat | 323..346 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 347..391 | CDD:275380 | 11/43 (26%) | ||
leucine-rich repeat | 392..413 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 393..448 | CDD:290566 | 18/56 (32%) | ||
leucine-rich repeat | 414..437 | CDD:275380 | 7/22 (32%) | ||
LRRCT | 471..517 | CDD:214507 | 15/49 (31%) | ||
Lingo4 | NP_001102659.1 | leucine-rich repeat | 87..110 | CDD:275380 | 7/22 (32%) |
LRR_8 | 88..145 | CDD:290566 | 24/84 (29%) | ||
LRR_4 | 88..126 | CDD:289563 | 15/64 (23%) | ||
LRR_RI | 110..345 | CDD:238064 | 87/359 (24%) | ||
leucine-rich repeat | 111..134 | CDD:275380 | 11/50 (22%) | ||
LRR_8 | 134..193 | CDD:290566 | 21/62 (34%) | ||
leucine-rich repeat | 135..158 | CDD:275380 | 11/23 (48%) | ||
leucine-rich repeat | 159..182 | CDD:275380 | 6/25 (24%) | ||
LRR_8 | 182..237 | CDD:290566 | 18/101 (18%) | ||
leucine-rich repeat | 183..206 | CDD:275380 | 7/43 (16%) | ||
leucine-rich repeat | 207..230 | CDD:275380 | 8/48 (17%) | ||
leucine-rich repeat | 231..254 | CDD:275380 | 7/38 (18%) | ||
leucine-rich repeat | 255..302 | CDD:275380 | 17/68 (25%) | ||
LRR_8 | 278..334 | CDD:290566 | 22/71 (31%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 326..385 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 327..348 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 351..374 | CDD:275380 | 4/23 (17%) | ||
IG_like | 445..526 | CDD:214653 | |||
Ig | 456..526 | CDD:299845 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166348967 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |