DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5819 and Con

DIOPT Version :9

Sequence 1:NP_001246458.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster
Sequence 2:NP_001246635.1 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster


Alignment Length:409 Identity:102/409 - (24%)
Similarity:171/409 - (41%) Gaps:87/409 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 LRKLDVSYCN---LDSIE---LSGLPQLTEVRLQGNLLRVVDVNTFANNSMLEVVDLSQNVLRHI 312
            ||:|.....|   ||.|.   :..|..|:.:.::.:.:.:|....|||...||.:.|:.|.:..:
  Fly   158 LRELKFVIQNNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHIMAL 222

  Fly   313 GQDAFAKLKRLKELNLAFNEIARLDRN-----------FIRNNDV-------------LVELNLS 353
            .|||||...||:||||..|:|..:||.           |:.||::             |..|||:
  Fly   223 DQDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLA 287

  Fly   354 RNVLQKLTKIVSNSVRTIN---MSWCEITSIESTALSSLSVIQKLDLSNNLITDMPTFMRSE--- 412
            .|.:..||..:...:..:|   ::...:..|..|..:.|..:.:|:|.:|.|..:     ||   
  Fly   288 HNQINVLTSEIFRGLGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERI-----SERAL 347

  Fly   413 ----TLQQLNLANCRLTTVRNNTFREFPELADLHLNGNRLTS-------PIPPNYFDGNKFLDQL 466
                ||:.|||.|..|..:.|...|..|.|..:::..|:|.:       ||..|..:..   .:|
  Fly   348 DGLNTLKTLNLRNNLLKKIDNGLLRGTPALLSINVQANKLETLTFYTFQPIMDNLVNST---SEL 409

  Fly   467 WLGDNPWICDCHSPLFVDFYDYLTAKPAKIKDR-NHLRCAAPAVFYGKLWEF------ACADVWI 524
            .:.||.:||||......:..:  ..:..:::|. ..|.|....   .||..|      ...||..
  Fly   410 LVSDNKFICDCRLQWIFELKN--RTRHLQLRDSLEDLHCTLQE---PKLSHFVDPVPPTILDVLN 469

  Fly   525 LNARTSSTGEKAWSIIMLTLLGLGALVLG--YACL-----QKYL--RKRKVRQSDREY---EEN- 576
            :...|:.....|      ::.|:|..|:|  |:.|     :|:|  |.|:..:..|::   .|| 
  Fly   470 IGGFTAIGSNSA------SMGGVGNSVVGSSYSGLTMDDSRKHLGSRSRQALRGQRQFASSAENV 528

  Fly   577 -DDELRRIRDLNERILREE 594
             :.::||.|...|.:..::
  Fly   529 VESKMRRRRKRQEEVKEKD 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5819NP_001246458.1 leucine-rich repeat 56..78 CDD:275380
LRR_RI <58..236 CDD:238064
LRR_8 78..141 CDD:290566
leucine-rich repeat 79..102 CDD:275380
leucine-rich repeat 103..130 CDD:275380
leucine-rich repeat 131..155 CDD:275380
LRR_8 156..214 CDD:290566
leucine-rich repeat 158..182 CDD:275380
LRR_8 202..285 CDD:290566 9/36 (25%)
leucine-rich repeat 204..227 CDD:275380
leucine-rich repeat 254..274 CDD:275380 8/25 (32%)
LRR_8 273..333 CDD:290566 21/59 (36%)
leucine-rich repeat 275..298 CDD:275380 5/22 (23%)
LRR_RI 277..>471 CDD:238064 60/234 (26%)
leucine-rich repeat 299..322 CDD:275380 9/22 (41%)
LRR_8 321..402 CDD:290566 27/107 (25%)
leucine-rich repeat 323..346 CDD:275380 12/33 (36%)
leucine-rich repeat 347..391 CDD:275380 11/46 (24%)
leucine-rich repeat 392..413 CDD:275380 6/27 (22%)
LRR_8 393..448 CDD:290566 18/61 (30%)
leucine-rich repeat 414..437 CDD:275380 8/22 (36%)
LRRCT 471..517 CDD:214507 10/46 (22%)
ConNP_001246635.1 LRR_RI <147..291 CDD:238064 40/132 (30%)
LRR_8 183..243 CDD:290566 21/59 (36%)
leucine-rich repeat 185..208 CDD:275380 5/22 (23%)
leucine-rich repeat 209..232 CDD:275380 9/22 (41%)
LRR_RI <225..416 CDD:238064 53/198 (27%)
LRR_8 232..291 CDD:290566 18/58 (31%)
leucine-rich repeat 233..256 CDD:275380 9/22 (41%)
leucine-rich repeat 257..280 CDD:275380 3/22 (14%)
leucine-rich repeat 281..304 CDD:275380 7/22 (32%)
LRR_8 304..363 CDD:290566 16/63 (25%)
leucine-rich repeat 305..328 CDD:275380 4/22 (18%)
leucine-rich repeat 329..352 CDD:275380 6/27 (22%)
LRR_8 352..416 CDD:290566 19/66 (29%)
leucine-rich repeat 353..376 CDD:275380 8/22 (36%)
LRRCT 414..>450 CDD:214507 8/37 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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