DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5819 and CG4168

DIOPT Version :10

Sequence 1:NP_611660.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster
Sequence 2:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster


Alignment Length:996 Identity:220/996 - (22%)
Similarity:378/996 - (37%) Gaps:300/996 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 QTYPN-FDGI--PVEHLDLSGNKFLEFPTLYADIDSLIYLDLSSNYISSIGAKTLIGFT-SLRTL 106
            :.:|: |:|:  .:|:|||..|:....|...:.:..|.||.|:||.||.:  ..|..|| :||.|
  Fly   401 RVHPSAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQISQL--NNLPSFTENLRVL 463

  Fly   107 LLANNSIDSWESLSPNEAFKYAPSLKRLGLDGNRL----------GSFGNGESFELLTSSSLTDL 161
            .|:.|:.    |:.|....|....|..|.:..|.:          .|:|:.....||.::.:|.|
  Fly   464 SLSGNNF----SMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHL 524

  Fly   162 GLSSCGISSIGGDQMVNQLPNLERLNLANNQLA-------------------QIAALPSRTLRVL 207
            .|     .|..|      |..::.::|:.|.:.                   ..|..|:|:|..|
  Fly   525 HL-----GSFAG------LEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPARSLESL 578

  Fly   208 D---------------LSNCSIKNLSGFFLDAMQNLEALNLSRNT-------ELQFDSLSEDPIL 250
            |               |.|.::|.:|......|:.|..:|||.|.       ..|.|:.|.    
  Fly   579 DPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSH---- 639

  Fly   251 TYMLRKLDVSYCNLDSIE---LSGLPQLTEVRLQGNLLRVVDVNTFANNSMLEVVDLSQNVLRHI 312
               |.::|:||..|:.:|   ...|..|..:.||.|.||.:..:.|.|...|..:|||.|.|.:|
  Fly   640 ---LVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNI 701

  Fly   313 GQDAFAKLKRLKELNLAFNEIARLDRN---FIRNNDVLVELNLSRNVL----------------- 357
            ...||..|..|..|:|..|::..|...   ::.|....:.||:|.|.:                 
  Fly   702 SHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLD 766

  Fly   358 ---QKLTKI-----VSNSVRTINMSWCEITSIESTALSSLSVIQKLDLSNNLITDM--PTFMRSE 412
               ..:||.     ::|::|.:|::..::.|::|.|...|..::.|::::|.:|.:  .:|....
  Fly   767 ISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLN 831

  Fly   413 TLQQLNLANCRLTTVRNNTFREFPELADLHLNGNRLTSPIPPNYFDGNK--FLDQLWLGDNP--- 472
            :||:|:|::.:|..::...|....:|..|.:|.|||.: :|...|...:  |||   :.:|.   
  Fly   832 SLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRA-LPREVFMNTRLEFLD---IAENQLSV 892

  Fly   473 WICDCHSPLFVDFYDYLTAKPAKIKDRNHLRCAAPAVFYGKLWEFACADVWILNARTSSTGEKAW 537
            |    ..|.|.|.  ..|.:..:: ..|:|.....::|....:.:   |:.:...|.:...:..:
  Fly   893 W----PVPAFTDI--GFTLRSIQM-SHNNLEYLDASMFINSQFLY---DISLARNRITILPDNTF 947

  Fly   538 SII-MLTLLGLGALVLGYACLQKYLRKRKVRQSDREYEENDDELRRIR----------------- 584
            |.: .||.|.|....|             |..:.||...:...||::.                 
  Fly   948 SFLNNLTNLDLSQNPL-------------VTTNLREVFVHTPRLRKLSLHHMGLYVLPPLKLPLL 999

  Fly   585 ---DLNERILREEATP--SLQHTQEISLLPSYED-------ALRMPKLVR-------PVK----- 625
               |::...| :|.:|  ||:|.:.:::  |:..       |..:|..||       |::     
  Fly  1000 SYLDVSGNYL-QELSPLGSLRHLRHVNV--SHNKLTNASCAAEHLPPSVRVLDLAHNPLRRITLH 1061

  Fly   626 -----------SMMD--LSGPE---RARNSRKLRRSQTHAD-GD------GSQS------EAEDG 661
                       :::|  ::.|:   :.|:.|||..| :||: |:      |.|.      |...|
  Fly  1062 DLASLRHLAELNILDVKVTNPQAFSKLRSLRKLHAS-SHANLGEIVARIPGLQQLRVHCLEPNIG 1125

  Fly   662 LQLDSRQRFRSVEMLSNRDKERTAQ-YG-------PYRRTGYMEYNQSGSRRFSIEDSRFPAAHL 718
            .||.::        |:|..|.|..: ||       |...||.     |.|:|..::.|     |.
  Fly  1126 QQLFAK--------LANNTKIRLLELYGSNVQTIAPDVFTGL-----SRSQRLQVKIS-----HT 1172

  Fly   719 KTQNLQSAEQIGNFQSYENSPYTKRK-PKIAEIPPFKRVNMMADSVEFLTDPEYDEVGSKH--GS 780
            :..:|..    |.|       |..|: |.::......|:|.:|....:.....:|.||::.  |.
  Fly  1173 RISDLPP----GIF-------YALREVPHLSIDISHNRINALAADSFYPNKSYWDAVGTRSIMGG 1226

  Fly   781 PFAKRKPKPPVLPPPT------------MKVSAQVYTLQQS-----------------------P 810
            ......|    |....            ::.|||:..:|:.                       |
  Fly  1227 LITSHNP----LECECGLVWFGHWLRRWLRESAQIKVIQKDDLKRMVQRARANTCHDPTSGRHLP 1287

  Fly   811 VLELDPAIEDYFSAARKQPSS 831
            :||:.|  ||....|....||
  Fly  1288 ILEIFP--EDLLCQASALSSS 1306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5819NP_611660.1 RNA1 <56..193 CDD:444072 40/147 (27%)
leucine-rich repeat 56..78 CDD:275380 6/21 (29%)
leucine-rich repeat 79..102 CDD:275380 11/23 (48%)
leucine-rich repeat 103..130 CDD:275380 8/26 (31%)
leucine-rich repeat 131..155 CDD:275380 7/33 (21%)
LRR 134..>466 CDD:443914 98/417 (24%)
leucine-rich repeat 158..182 CDD:275380 6/23 (26%)
leucine-rich repeat 204..227 CDD:275380 8/37 (22%)
leucine-rich repeat 254..274 CDD:275380 7/22 (32%)
leucine-rich repeat 275..298 CDD:275380 8/22 (36%)
leucine-rich repeat 299..322 CDD:275380 10/22 (45%)
leucine-rich repeat 323..346 CDD:275380 6/25 (24%)
leucine-rich repeat 347..391 CDD:275380 13/68 (19%)
leucine-rich repeat 392..413 CDD:275380 4/22 (18%)
leucine-rich repeat 414..437 CDD:275380 6/22 (27%)
LRRCT 471..517 CDD:214507 9/48 (19%)
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268
leucine-rich repeat 99..118 CDD:275380
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR <338..651 CDD:443914 66/273 (24%)
leucine-rich repeat 339..365 CDD:275380
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380 3/10 (30%)
leucine-rich repeat 414..436 CDD:275380 6/21 (29%)
leucine-rich repeat 437..459 CDD:275380 11/23 (48%)
leucine-rich repeat 460..483 CDD:275380 8/26 (31%)
leucine-rich repeat 484..510 CDD:275380 5/25 (20%)
leucine-rich repeat 511..534 CDD:275380 8/33 (24%)
leucine-rich repeat 535..589 CDD:275380 8/53 (15%)
LRR 543..971 CDD:443914 104/461 (23%)
leucine-rich repeat 590..613 CDD:275380 5/22 (23%)
leucine-rich repeat 614..639 CDD:275380 7/24 (29%)
leucine-rich repeat 640..663 CDD:275380 7/22 (32%)
leucine-rich repeat 664..687 CDD:275380 8/22 (36%)
leucine-rich repeat 688..711 CDD:275380 10/22 (45%)
leucine-rich repeat 712..735 CDD:275380 5/22 (23%)
leucine-rich repeat 740..783 CDD:275380 6/42 (14%)
leucine-rich repeat 785..808 CDD:275380 6/22 (27%)
leucine-rich repeat 809..832 CDD:275380 4/22 (18%)
leucine-rich repeat 833..856 CDD:275380 6/22 (27%)
leucine-rich repeat 857..879 CDD:275380 8/22 (36%)
leucine-rich repeat 880..900 CDD:275380 7/26 (27%)
leucine-rich repeat 905..928 CDD:275380 3/23 (13%)
LRR 911..>1203 CDD:443914 67/340 (20%)
leucine-rich repeat 929..952 CDD:275380 3/25 (12%)
leucine-rich repeat 953..977 CDD:275380 8/36 (22%)
leucine-rich repeat 978..1020 CDD:275380 8/42 (19%)
leucine-rich repeat 1045..1068 CDD:275380 3/22 (14%)
leucine-rich repeat 1069..1090 CDD:275380 2/20 (10%)
leucine-rich repeat 1091..1114 CDD:275380 8/23 (35%)
leucine-rich repeat 1115..1161 CDD:275380 13/58 (22%)
leucine-rich repeat 1162..1190 CDD:275380 9/43 (21%)
PCC 1230..>1298 CDD:188093 12/73 (16%)
Blue background indicates that the domain is not in the aligned region.

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