DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5819 and lron-5

DIOPT Version :9

Sequence 1:NP_001246458.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster
Sequence 2:NP_497943.2 Gene:lron-5 / 184307 WormBaseID:WBGene00008656 Length:656 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5819NP_001246458.1 leucine-rich repeat 56..78 CDD:275380
LRR_RI <58..236 CDD:238064
LRR_8 78..141 CDD:290566
leucine-rich repeat 79..102 CDD:275380
leucine-rich repeat 103..130 CDD:275380
leucine-rich repeat 131..155 CDD:275380
LRR_8 156..214 CDD:290566
leucine-rich repeat 158..182 CDD:275380
LRR_8 202..285 CDD:290566
leucine-rich repeat 204..227 CDD:275380
leucine-rich repeat 254..274 CDD:275380
LRR_8 273..333 CDD:290566
leucine-rich repeat 275..298 CDD:275380
LRR_RI 277..>471 CDD:238064
leucine-rich repeat 299..322 CDD:275380
LRR_8 321..402 CDD:290566
leucine-rich repeat 323..346 CDD:275380
leucine-rich repeat 347..391 CDD:275380
leucine-rich repeat 392..413 CDD:275380
LRR_8 393..448 CDD:290566
leucine-rich repeat 414..437 CDD:275380
LRRCT 471..517 CDD:214507
lron-5NP_497943.2 leucine-rich repeat 51..72 CDD:275380
LRR_8 72..131 CDD:338972
leucine-rich repeat 73..96 CDD:275380
LRR <92..>272 CDD:227223
leucine-rich repeat 97..120 CDD:275380
leucine-rich repeat 121..146 CDD:275380
leucine-rich repeat 147..168 CDD:275380
leucine-rich repeat 169..208 CDD:275380
leucine-rich repeat 209..237 CDD:275380
leucine-rich repeat 238..284 CDD:275380
leucine-rich repeat 327..351 CDD:275380
internalin_A 345..>576 CDD:380193
leucine-rich repeat 352..375 CDD:275380
leucine-rich repeat 376..391 CDD:275380
leucine-rich repeat 401..445 CDD:275380
leucine-rich repeat 446..478 CDD:275380
leucine-rich repeat 479..500 CDD:275380
leucine-rich repeat 501..522 CDD:275380
leucine-rich repeat 523..544 CDD:275380
LRRCT 553..601 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.