DRSC/TRiP Functional Genomics Resources

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Protein Alignment dve and Satb2

DIOPT Version :10

Sequence 1:NP_477242.1 Gene:dve / 37546 FlyBaseID:FBgn0020307 Length:1024 Species:Drosophila melanogaster
Sequence 2:XP_008765351.1 Gene:Satb2 / 501145 RGDID:1562369 Length:740 Species:Rattus norvegicus


Alignment Length:909 Identity:185/909 - (20%)
Similarity:291/909 - (32%) Gaps:334/909 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 RRSSEGTPPTAHPPTNSEGQALSSSTASSSQNATPKSDRERERERERDREERVERGSISCLPPAA 214
            |||  |:|....||        ....|...||.:|...|.|                    |..|
  Rat    16 RRS--GSPDVKGPP--------PVKVARLEQNGSPMGARGR--------------------PNGA 50

  Fly   215 LGMAVGVQQAQHQEKLLSHPALDSRREFDVSKVNPKSLPLHCVVESVHSLHASLTIDTRQPWKRR 279
            :..|||....:                     :....:|:.||||   .|..||..|.|:     
  Rat    51 VAKAVGGNSPE---------------------LGGLMIPVFCVVE---QLDGSLEYDNRE----- 86

  Fly   280 PNIETDSYVIIAAATPWSEIVQTALQRLGYSQEVANTARGSLIIKHWKPIPLEQISDNPAVPVSD 344
               |...:|::.....:|::|:|||..||||...|..|:|.:.:..|.|:||..::|.|...|:|
  Rat    87 ---EHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKLGRWNPLPLSYVTDAPDATVAD 148

  Fly   345 IVGELTSVITLRIVI--------LRPKTSPFGEIKDKLLKLLVLQSHAVLRSTGCPLDEVTLSQI 401
            ::.::..|:||:|.:        |..:......:::.|.:||...:.:.| :..|||.:..:|.|
  Rat   149 MLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALKELLKEMNQSTL-AKECPLSQSMISSI 212

  Fly   402 CRSSHQNTYALPGGEISDELRRKFDQWWS------------NQLSPQAT-AMTPKMLPFMTGPSA 453
            ..|::   ||    .:|....::|.:|:.            ..||.... ...|..||.|     
  Rat   213 VNSTY---YA----NVSATKCQEFGRWYKKYKKIKVERVERENLSDYCVLGQRPMHLPNM----- 265

  Fly   454 VPVPVAVPGEMDFPVGTAMAAAAAAAAHAAAAGGAAGGNPLGSMGSRESLLLANEAAHHAGAGQA 518
                                                  |.|.|:|.      .||        |:
  Rat   266 --------------------------------------NQLASLGK------TNE--------QS 278

  Fly   519 PGPGHHGSMLVHPMHASMHHHHHHGGGGGHGPPYPNQKTRMRTSFDPEMELPKLQKWFADNPHPS 583
            |             |:.:|          |..|..||...::....|.:..|:|      :|...
  Rat   279 P-------------HSQIH----------HSTPIRNQVPALQPIMSPGLLSPQL------SPQLV 314

  Fly   584 RQQI-QTYVVQLNALESR---------------------RGRKP------LDVNNVVYWFKNARA 620
            |||| ..:::......||                     |..||      ::|:..:|       
  Rat   315 RQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEVSPDIY------- 372

  Fly   621 AQKRAEMRGGSLGSAISALGHAAMN---GYLSQHAPLGQNSSSSAGSQPMSMGNLSMSHDYLKSP 682
            .|.|.|::..|:..|:.|  ..|.|   |.||:  .|.:.......||.: :.||....::|..|
  Rat   373 QQVRDELKRASVSQAVFA--RVAFNRTQGLLSE--ILRKEEDPRTASQSL-LVNLRAMQNFLNLP 432

  Fly   683 LSLKSEDIDTMSQHSDDMDEEQSRPNTPQL------PLSLTTHERHRSSPLMDEDEDEAGEQQQP 741
                ..:.|.:.|   |..|....||...:      |.|..|.:...|:|..|            
  Rat   433 ----EVERDRIYQ---DERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTD------------ 478

  Fly   742 QEAKSDGMN----GSVKDEERQEKSRDELQD--------NE-----------KENSNGEDRHL-- 781
            ...|.||.|    .::.||.:||..|.::..        |:           |||.:.|:|.|  
  Rat   479 LPIKVDGANVNITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWE 543

  Fly   782 --------------DADAQMEASSNLNNNHNNSSLHI------------EQEVGSTPKRSTPKEE 820
                          :.|...|..|  .::|:....|:            .|:...|.:.|.|:||
  Rat   544 NLCTIRRFLNLPQHERDVIYEEES--RHHHSERMQHVVQLPPEPVQVLHRQQSQPTKESSPPREE 606

  Fly   821 -------DDDLDMDEDEEDNENDASHLDEFRSPSPDLAGGVVPHKD-------QLPFPMVPNSMF 871
                   .:|....:.....:.....|...:|...|:  |:.|.::       ||..|       
  Rat   607 APPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDV--GLYPDQEAIHTLSAQLDLP------- 662

  Fly   872 SQSFMYMSHYIPAFGQAAAGHPHHHA------AAAAAAAGIQPNALMGGGGLNLSSISNEERRK 929
                   .|.|..|.|....|..||.      .:|...|..:...|:.....|.|...::|..|
  Rat   663 -------KHTIIKFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSDEMYK 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dveNP_477242.1 ULD 250..359 CDD:465165 36/108 (33%)
HOX 556..623 CDD:197696 15/94 (16%)
HOX 928..995 CDD:197696 1/2 (50%)
Satb2XP_008765351.1 ULD 65..163 CDD:465165 36/108 (33%)
CUTL 169..240 CDD:435427 16/78 (21%)
CUT 362..440 CDD:460543 21/93 (23%)
CUT 484..563 CDD:460543 16/78 (21%)
HOX 621..678 CDD:197696 13/72 (18%)

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