DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dve and satb1a

DIOPT Version :9

Sequence 1:NP_477242.1 Gene:dve / 37546 FlyBaseID:FBgn0020307 Length:1024 Species:Drosophila melanogaster
Sequence 2:NP_001073631.1 Gene:satb1a / 378993 ZFINID:ZDB-GENE-031010-36 Length:728 Species:Danio rerio


Alignment Length:856 Identity:166/856 - (19%)
Similarity:276/856 - (32%) Gaps:287/856 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 LDSRREFDVSKVNPKS--------------LPLHCVVESVHSLHASLTIDTRQPWKRRPNIETDS 286
            :::.|:..|..|.|.|              ||:.|:||           .:..|.......|...
Zfish    28 MENCRDLPVPGVTPVSSKQTSHTNRRKGSLLPVFCMVE-----------QSDVPPSEGKRSEHAE 81

  Fly   287 YVIIAAATPWSEIVQTALQRLGYSQEVANTARGSLIIKHWKPIPLEQISDNPAVPVSDIVGELTS 351
            :|::.....:|:|.:.|||.|||:...|..|.|.:.:.||.|:.|..::|.....|.|::.:|..
Zfish    82 FVLLKKDLLFSQITEAALQELGYTHTAAALATGQIQVGHWNPVALSSVTDVSDATVGDMLQDLYH 146

  Fly   352 VITLRIVILRPKTSPFGEIKD------------KLLKLLVLQSHAVLRSTGCPLDEVTLSQICRS 404
            ||||||     |.....:::|            ..||.|:.:.:....:..|||.:..:|.:...
Zfish   147 VITLRI-----KLHSVSKLEDLPAEQWTHSTVRNALKDLLKEMNQSTLAKECPLSQSMISSVVNG 206

  Fly   405 SHQNTYALPGGEISDELRRKFDQWWSNQLSPQATAMTPKMLPFMTGPSAVPVPVAVPGEMDFPVG 469
            ::   ||    .||....::|.||:.:.  .:..|:...|....|.||:...|......|:    
Zfish   207 TY---YA----SISAARCQEFGQWYKHY--KRTKAIMGDMSRQCTQPSSSSQPSMFQQPME---- 258

  Fly   470 TAMAAAAAAAAHAAAAGGAAGGNPLGSMGSRESLLLANEAAHHAGAGQAPGPGHHGSMLVHPMHA 534
                            |.:|....:..|                   ||..||...:.|:...||
Zfish   259 ----------------GSSAESRGVVQM-------------------QAGMPGLVMAQLLSQQHA 288

  Fly   535 S---MHHHHHHGGGGGHGPPYPNQKTRMRTSFDPEMELPKLQKWFADNPHPSRQQIQTYVVQLNA 596
            .   :.|.|.|    .|.|.....||..:.:..|                |:..|..:.|.    
Zfish   289 MSQLLTHAHTH----SHIPHPAPLKTPPKCNVSP----------------PTVTQCPSPVT---- 329

  Fly   597 LESRRGRKPLDVNNVVY-WFKNARAAQKRAEMRGGSLGSAISALGHAAMN---GYLSQHAPLGQN 657
                      ||:..:| |.        |.|::...:..|:.|  ..|:|   |.||:  .|.:.
Zfish   330 ----------DVSPEIYHWV--------REELKRAGVSQAVFA--RVAINRTQGLLSE--ILRKE 372

  Fly   658 SSSSAGSQPMSMGNLSMSHDYLKSPLSLKSEDIDTMSQHSDDMDEEQSRPNTPQLPLSLTTHERH 722
            ......||.: :.||.....:|:.|          .||......||:.|...       |.:..:
Zfish   373 EDPRCASQSL-LVNLRAMQSFLQLP----------QSQRDSIYVEERERNLN-------TAYNTN 419

  Fly   723 RSSPLMDEDEDEAGEQQQPQEAK---------------SDGMNGSVKDEERQEKSRDELQD---- 768
            .||||             |.:||               ..|:|..:.:|.:||..|.::..    
Zfish   420 TSSPL-------------PIQAKLSPVSKDIVVKVECDDTGINYGIYEEIQQEMRRAKVSQALFA 471

  Fly   769 ---------------NEKENSNGEDRHLDADAQMEASSNLNNNHNNSSLHIEQEVGSTPKRSTPK 818
                           ..||..:.::|.|               ..|.|| |.|.:..:       
Zfish   472 KVSAAKSQGWLCELLRWKEEPSPQNRTL---------------WENLSL-IRQFLNLS------- 513

  Fly   819 EEDDDLDMDEDEEDNENDASHLDEFRSPSPDLAGGVVP--------HKDQLPFPMVPNSMFSQSF 875
              ..:.|:..|:|.|.....:.::...|..:.. .|:|        |:.....|...:.:|.|..
Zfish   514 --QSERDIIYDQESNTGQTFYSEKHTRPLTEQL-QVIPQHMVALKQHQQLHKIPPQHHQLFLQHH 575

  Fly   876 M--------YMSHYIPAFG----------------QAAAGHPHHHAA-AAAAAAGIQPNALMG-G 914
            :        ||:   |.||                |....||...|. ..:|..|:...|::. .
Zfish   576 LMAGSLKDTYMA---PNFGGRSLPPEAHAILQSFIQEVGLHPDQEAIHTLSAQLGVAKEAVLSFF 637

  Fly   915 GGLNLSSISNEERRKRNRTFIDPVTEVPKLEQWFAMNTHPSHNLILKYTEDLN------------ 967
            .|.|.  :..|:..:|.....|...:..:.|..|..|...::..::...:||:            
Zfish   638 SGHNW--LRQEQDNRREIEIEDGEDDYMEAEDEFEENIEKTNASMMTGKQDLSADEQNAATQTRF 700

  Fly   968 --TMPYRQKFP 976
              |:...::||
Zfish   701 IITIKQEEEFP 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dveNP_477242.1 SATB1_N 252..358 CDD:211426 32/105 (30%)
HOX 556..623 CDD:197696 10/67 (15%)
PPP4R2 <644..778 CDD:286293 32/170 (19%)
HOX 928..995 CDD:197696 10/63 (16%)
satb1aNP_001073631.1 SATB1_N 58..153 CDD:211426 33/110 (30%)
CUTL 184..231 CDD:293165 11/55 (20%)
CUT 332..403 CDD:280527 20/93 (22%)
CUT 443..520 CDD:280527 16/101 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595535
Domainoid 1 1.000 59 1.000 Domainoid score I10644
eggNOG 1 0.900 - - E1_KOG3755
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 92 1.000 Inparanoid score I5076
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24448
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.880

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