DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dve and Satb1

DIOPT Version :9

Sequence 1:NP_477242.1 Gene:dve / 37546 FlyBaseID:FBgn0020307 Length:1024 Species:Drosophila melanogaster
Sequence 2:NP_001344565.1 Gene:Satb1 / 20230 MGIID:105084 Length:796 Species:Mus musculus


Alignment Length:989 Identity:192/989 - (19%)
Similarity:328/989 - (33%) Gaps:330/989 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 HQQQAQQAGAGVGSGELAGRRSSEGTPPTAHPPTNSEGQALSSSTASSSQNATPKSDRERERERE 195
            |..:|.|   |....|::...|....||              :..|...||.:|           
Mouse     3 HLNEATQ---GKEHSEMSNNVSDPKGPP--------------AKIARLEQNGSP----------- 39

  Fly   196 RDREERVERGSISCLPPAALGMAVGVQQA---QHQEKLLSHPALDSRREFDVSKVNPKS---LPL 254
                  :.||        .||...|..|.   :|...|:              |.|.:.   ||:
Mouse    40 ------LGRG--------RLGSTGGKMQGVPLKHSGHLM--------------KTNLRKGTMLPV 76

  Fly   255 HCVVESVHSLHASLTIDTRQPWKRRPNIETDSYVIIAAATPWSEIVQTALQRLGYSQEVANTARG 319
            .||||...:   ::..|.::        |...:|::.....::::::.||..||||...|..|:|
Mouse    77 FCVVEHYEN---AIEYDCKE--------EHAEFVLVRKDMLFNQLIEMALLSLGYSHSSAAQAKG 130

  Fly   320 SLIIKHWKPIPLEQISDNPAVPVSDIVGELTSVITLRIVI--------LRPKTSPFGEIKDKLLK 376
            .:.:..|.|:||..::|.|...|:|::.::..|:||:|.:        |.|:......:::.|..
Mouse   131 LIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLEDLPPEQWSHTTVRNALKD 195

  Fly   377 LLVLQSHAVLRSTGCPLDEVTLSQICRSSHQNTYALPGGEISDELRRKFDQWWSNQLSPQATAMT 441
            ||...:.:.| :..|||.:..:|.|..|::   ||    .:|....::|.:|:.:      ...|
Mouse   196 LLKDMNQSSL-AKECPLSQSMISSIVNSTY---YA----NVSAAKCQEFGRWYKH------FKKT 246

  Fly   442 PKMLPFMTGPSAVPVPVAVPGEMDFPVGTAMAAAAAAAAHAAAAGGAAGGNPLGSMGSRESLLLA 506
            ..|:.                |||                              |:..     |:
Mouse   247 KDMMV----------------EMD------------------------------SLSE-----LS 260

  Fly   507 NEAAHHAGAGQAPGPGHHGSMLVHPMHASMHHHHHHGGGGGHGPPYPN-QKTRMRTSFDPEMELP 570
            .:.|:|...||.|.||:.......|...|      ||.......|.|| ....:.|...|::...
Mouse   261 QQGANHVNFGQQPVPGNTAEQPPSPAQLS------HGSQPSVRTPLPNLHPGLVSTPISPQLVNQ 319

  Fly   571 K------LQKWFADNPHPSRQQIQTYVVQLNALESRRGRKPL--------DVNNVVY-WFKNARA 620
            :      |.:.:|.|...::|.:....:......||...|||        :|::.:| |.     
Mouse   320 QLVMAQLLNQQYAVNRLLAQQSLNQQYLNHPPPVSRSMNKPLEQQVSTNTEVSSEIYQWV----- 379

  Fly   621 AQKRAEMRGGSLGSAISALGHAAMN---GYLSQHAPLGQNSSSSAGSQPMSMGNLSMSHDYLKSP 682
               |.|::...:..|:.|  ..|.|   |.||:  .|.:.......||.: :.||....::|:.|
Mouse   380 ---RDELKRAGISQAVFA--RVAFNRTQGLLSE--ILRKEEDPKTASQSL-LVNLRAMQNFLQLP 436

  Fly   683 LSLKSEDIDTMSQHSDDMDEEQSRPNTPQ----LPLSLTTHERHRSSPLMDEDEDEAGEQQQPQE 743
                ..:.|.:.|     ||.:...|...    .||..|...|    |...:....|.|:....|
Mouse   437 ----EAERDRIYQ-----DERERSLNAASAMGPAPLLSTPPSR----PPQVKTATLATERNGKPE 488

  Fly   744 AKSDGMNGSVKDEERQEKSRDELQD-------------------NEKENSNGEDRHL-------- 781
            ..:..:|.|:.||.:||..|.::..                   ..||:.:.|:|.|        
Mouse   489 NNTMNINASIYDEIQQEMKRAKVSQALFAKVAATKSQGWLCELLRWKEDPSPENRTLWENLSMIR 553

  Fly   782 --------DADAQMEASSNLNNNHNNSSLHIEQEVGSTPKRSTPKEEDDDLDMDEDEEDNENDAS 838
                    :.||..|..||..::|.:...||..         .|.|:...|. .......|:...
Mouse   554 RFLSLPQPERDAIYEQESNAVHHHGDRPPHIIH---------VPAEQIQSLS-PSTLGKGESRGV 608

  Fly   839 HLDEFRSPSPDLAGGVVPH--------------KDQLPFPMVPNSMFSQSFMYMSHYIPAFGQAA 889
            .|....:|:|      .||              :.|.|.|..|                      
Mouse   609 FLPSLLTPAP------WPHAAPQQQQQQQQQQQQQQQPPPPPP---------------------- 645

  Fly   890 AGHPHHHAAAAAAAAGIQPNALMGGGGLNLSSISNEERRKRNRTFIDPVTEVPKLEQWFAMNTHP 954
              .|.....|.......||....       |:.|:||.|::.|    |.|::          :..
Mouse   646 --QPQPQPQAGPRLPPRQPTVAS-------SAESDEENRQKTR----PRTKI----------SVE 687

  Fly   955 SHNLILKYTEDLNTMPYRQKFPRLESK------NVQFWFKNRRAKCK---RLKMSLYDSNQCAQL 1010
            :..::..:.:|:...|..:....|.::      .:..:|:|:|...|   :||    |::     
Mouse   688 ALGILQSFIQDVGLYPDEEAIQTLSAQLDLPKYTIIKFFQNQRYYLKHHGKLK----DNS----- 743

  Fly  1011 GGLGSFVPKYEERD 1024
             ||...|.:|::.:
Mouse   744 -GLEVDVAEYKDEE 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dveNP_477242.1 SATB1_N 252..358 CDD:211426 29/105 (28%)
HOX 556..623 CDD:197696 14/81 (17%)
PPP4R2 <644..778 CDD:286293 33/159 (21%)
HOX 928..995 CDD:197696 10/72 (14%)
Satb1NP_001344565.1 ULD 72..170 CDD:374611 30/108 (28%)
CUTL 180..246 CDD:374627 16/79 (20%)
CUT 372..439 CDD:367059 18/83 (22%)
CUT 494..560 CDD:367059 12/65 (18%)
HOX 677..734 CDD:197696 9/70 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849749
Domainoid 1 1.000 64 1.000 Domainoid score I10091
eggNOG 1 0.900 - - E1_KOG3755
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7927
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42490
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4065
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.810

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