DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dve and satb2

DIOPT Version :9

Sequence 1:NP_477242.1 Gene:dve / 37546 FlyBaseID:FBgn0020307 Length:1024 Species:Drosophila melanogaster
Sequence 2:XP_031749255.1 Gene:satb2 / 100494002 XenbaseID:XB-GENE-5822252 Length:769 Species:Xenopus tropicalis


Alignment Length:898 Identity:185/898 - (20%)
Similarity:302/898 - (33%) Gaps:311/898 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 GQALSSSTASSSQ-------------NATPKSDRERERERE----RDREERVERGSISCLPPAAL 215
            ||:.|.|.||..|             .|...:.:..|...|    ||..:|......|..||..:
 Frog     4 GQSYSPSQASYRQASLSNPFYCELPGRALSPNQKGMEGRSESPSLRDSPDRGSNSPESKSPPPKM 68

  Fly   216 ------GMAVGVQQAQHQEKLLSHPALDSRREFDVSKVNPK-----SLPLHCVVESVHSLHASLT 269
                  |...|::               .|....:||.|..     .||:.||||.         
 Frog    69 ARLEQNGSPTGIR---------------GRPNGSLSKYNGDLDSGLMLPVFCVVEQ--------- 109

  Fly   270 IDTRQPWKRRPNIETDSYVIIAAATPWSEIVQTALQRLGYSQEVANTARGSLIIKHWKPIPLEQI 334
            :|.|:        |...:|::.....::::|:|||..||||...|..|:|.:.|..|.|:||..:
 Frog   110 MDNRE--------EHAEFVLVRRDVLFNQLVETALLALGYSHSSAAQAQGIIKIGRWNPLPLSYV 166

  Fly   335 SDNPAVPVSDIVGELTSVITLRIVILRPKTSPFGEIKD------------KLLKLLVLQSHAVLR 387
            :|.|.|.|:|::.::..|:||:|     :.....:::|            ..|::|:.:.:....
 Frog   167 TDAPDVTVADMLQDVYHVVTLKI-----QLQSCSKLEDLPAEQWNHATVRNALRMLLKEMNQSTL 226

  Fly   388 STGCPLDEVTLSQICRSSHQNTYALPGGEISDELRRKFDQWWS--NQLSPQATAMTPKMLPFMTG 450
            :..|||.:..:|.|..|::   ||    .:|....::|.:|:.  .::..:...:|...|   .|
 Frog   227 AKECPLSQSMISSIVNSTY---YA----NVSATKCQEFGRWYKKYKKMKVERDNLTDFCL---VG 281

  Fly   451 PSAVPVPVAVPGEMDFPVGTAMAAAAAAAAHAAAAGGAAGGNPLGSMGSRESLLLANEAAHHAGA 515
            |....:|                                ..|.|.|:|.      .:||      
 Frog   282 PRPTHLP--------------------------------NINQLASLGK------TSEA------ 302

  Fly   516 GQAPGPGHHGSMLVHPMHASMHHHHHHGGGGGHGPPYPNQKTRMRTSFDPEMELPKLQKWFADNP 580
                           |.|:.:|          |.||..:|...::....|.:..|:|      :|
 Frog   303 ---------------PPHSQLH----------HSPPIRSQVPSLQPIMSPGLLSPQL------SP 336

  Fly   581 HPSRQQI-QTYVVQLNALESR---------------------RGRKPLDVNNV-------VYWFK 616
            ...|||| ..:::......||                     |..||::..|.       ||   
 Frog   337 QLVRQQIAMAHLINQQLAVSRLLAHQHPQAINQQFLNHPPIPRPVKPVESTNSSVEVSPDVY--- 398

  Fly   617 NARAAQKRAEMRGGSLGSAISALGHAAMN---GYLSQHAPLGQNSSSSAGSQPMSMGNLSMSHDY 678
                .|.|.|::..|:..|:.|  ..|.|   |.||:  .|.:.......||.: :.||....::
 Frog   399 ----QQVRDELKRASVSQAVFA--RVAFNRTQGLLSE--ILRKEEDPRTASQSL-LVNLRAMQNF 454

  Fly   679 LKSPLSLKSEDIDTMSQHSDDMDEEQSRPNTPQLPLSLTTHERHRSS--PLMDEDEDEAGEQQQP 741
            |..|    ..:.|.:.|      :|:.|...|.:.|..|:.....||  |.|........:.|..
 Frog   455 LNLP----EAERDRIYQ------DERERSMNPNVSLLSTSSNSSSSSRVPQMKTSSTPTSDIQVK 509

  Fly   742 QEAKSDGMN--GSVKDEERQEKSRDELQD--------NE-----------KENSNGEDRHL---- 781
            .|.:...:|  ..|.||.:||..|.::..        |:           |||.:.|:|.|    
 Frog   510 VEGEGSNVNITAVVYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENL 574

  Fly   782 ------------DADAQMEASSNLNNNHNNSSLHIEQ--------EVGSTP----KRSTPKEEDD 822
                        :.||..|..|  .::|:....|:.|        .:|..|    :.|.|:||..
 Frog   575 CTIRRFLALPQHERDAVYEEES--RHHHSERLQHVVQLTPEPVQVLLGQQPQPAKETSPPREEVP 637

  Fly   823 DLDMDEDEEDNENDASH-------LDEFRSPSPDLAGGVVPHKD-------QLPFPMVPNSMFSQ 873
            .:....::...:...|.       |...:|...|:  |:.|.::       ||..|         
 Frog   638 PVPPPPEDSCTKKPRSRTKISLEALGILQSFIHDV--GLYPDQEAIHTLSAQLDLP--------- 691

  Fly   874 SFMYMSHYIPAFGQAAAGHPHHHAAAAAAAAGIQPNALMGGGGLNLSSISNEE 926
                 .|.|..|.|....|..||        ||....|  |..::::...:||
 Frog   692 -----KHTIIKFFQNQRYHVKHH--------GILKEHL--GIAVDVAEYKDEE 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dveNP_477242.1 SATB1_N 252..358 CDD:211426 34/105 (32%)
HOX 556..623 CDD:197696 16/95 (17%)
PPP4R2 <644..778 CDD:286293 35/159 (22%)
HOX 928..995 CDD:197696
satb2XP_031749255.1 SATB1_N 101..190 CDD:211426 35/110 (32%)
CUTL 197..267 CDD:406861 14/76 (18%)
CUT 388..466 CDD:396794 22/93 (24%)
CUT 515..592 CDD:396794 16/76 (21%)
HOX 650..707 CDD:197696 14/72 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10292
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47589
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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