DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp58Dc and slco1f4

DIOPT Version :10

Sequence 1:NP_611659.2 Gene:Oatp58Dc / 37545 FlyBaseID:FBgn0034716 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001074135.2 Gene:slco1f4 / 791184 ZFINID:ZDB-GENE-070112-2172 Length:644 Species:Danio rerio


Alignment Length:646 Identity:189/646 - (29%)
Similarity:294/646 - (45%) Gaps:117/646 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 SMTYAYFNGTITTIEKRFKIPSKNTGIISVGNDISQTLVSAVLAYYAGKGHRPRWIGFGLLTIVF 189
            |||.:|...|||.|||||:|||...|.|....::...||..:::|...|.|||:.||.|:|.:..
Zfish    41 SMTGSYTKSTITQIEKRFEIPSSTVGFIDGSFEMGNMLVITLVSYIGAKFHRPKIIGAGVLLMGI 105

  Fly   190 FCILTTAPHFLYGPGE--DALALTSEFGGMPDENATMEAIEEQRSKTLCRLNGGGAECEVGEGNF 252
            ..:|..:||||.|..:  .|...|::.|..    ..:........:||.:...|   |:..|...
Zfish   106 GTLLMASPHFLMGRYKYGTAATHTNDAGNF----TVISTCSSDSQETLQQPFSG---CQKEEAES 163

  Fly   253 AP-QLLLFVAQFISGIGGSLYYTLGVSYMDDNTKKSKTPALLSLSYFLRMLGPAIGYALASFCLR 316
            :| .:::.:...:.|||.:....||:|::||..:...:...:.....|:.:||..||.|.|.|..
Zfish   164 SPFWVIVVLGNTMRGIGEASIVPLGMSFIDDYARPENSAFYIGCLNTLKGIGPIFGYMLGSLCAN 228

  Fly   317 LYI----APQMHPVINNKDPRWLGAWWLGWLVMGGLLSFSGVFLSMF-PKELPRAVARRKVEENR 376
            ||:    ..|....|..:|.||:||||||: |:.|||:....|...| ||.||            
Zfish   229 LYVDFGLVDQESVTITPQDSRWVGAWWLGY-VVSGLLTLLAAFPFWFLPKVLP------------ 280

  Fly   377 RREKERLSVKSTEKERLTAELDQKTTAEAKASFQDMLKTFRRLITNKTYMCNTLSSIFYLVGYTP 441
              |..::|:.....::      .|||.......:|...||:||:|||.|:   |...:.:|.:..
Zfish   281 --ENSQISLLDNTPQQ------HKTTPSLTEIVKDFAPTFKRLLTNKIYI---LYLAYSIVAFND 334

  Fly   442 YWI---FTPKYIEVQYRQSAATSSMVTGTVALAFSAVGVLLSGFIISRYKPRARYMAAWNVI--- 500
            :.|   :||||:|.|:.|||:.::.:.|..::...|:||.|||.::.|:|        |.::   
Zfish   335 FAIVATYTPKYLEQQFGQSASKANFLIGVTSIPAVALGVFLSGLMMKRFK--------WGLLASA 391

  Fly   501 -VGFLTVAGILAYAFIGCPGNESSVIVNIHDSSLAGNTT-----------------TCNSACSCD 547
             |..||   |:|..|:..|    ...::..:..:||.|.                 :||:.|.|.
Zfish   392 RVNLLT---IVATVFLAVP----FFALSCENLDIAGVTVPYQGSTEVQGVTSDVLPSCNADCGCP 449

  Fly   548 YVRYSPVCGENNMTYISACHAGCKKLLVNSEGKKI-FYDCSCIPSDDAGNSTSQFKRLTSFDLSN 611
            .:::.||||||.:||||.|||||..  ....|:.: |:||.||               .|:.|| 
Zfish   450 DLQWDPVCGENGVTYISPCHAGCNS--TQGAGRNMTFHDCRCI---------------QSWGLS- 496

  Fly   612 DEVSQNTSVHSQLEALANGQAMPGAC--PVNCWTQFVAFLAVMCCLKFVGASGRASNFLVSVRCV 674
                           :.|..|:.|.|  ...|......:|.:.....|:...|....|.:|:|.|
Zfish   497 ---------------VGNSSAVLGQCSRDPKCNRMIYIYLGLQSLAFFLCGLGIIPFFTMSLRIV 546

  Fly   675 PEKDKTAAMGFGMTLCSMLAFIPSPIFFGWVFDRVCLVWG--KTCTNKGNCWLYDPLSMRY 733
            ..:.|:.::|..:....:|..||:||:||.:.|..||.||  |:| .:|.|.:||..:.|:
Zfish   547 DPELKSLSVGMLLLAVRVLGGIPAPIYFGALIDSTCLKWGQNKSC-GRGACRIYDIETFRF 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp58DcNP_611659.2 OATP 113..731 CDD:460821 188/642 (29%)
slco1f4NP_001074135.2 MFS 26..544 CDD:475125 166/581 (29%)

Return to query results.
Submit another query.