DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp58Dc and Slco1b2

DIOPT Version :9

Sequence 1:NP_001097409.1 Gene:Oatp58Dc / 37545 FlyBaseID:FBgn0034716 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_113838.1 Gene:Slco1b2 / 58978 RGDID:69300 Length:687 Species:Rattus norvegicus


Alignment Length:775 Identity:209/775 - (26%)
Similarity:334/775 - (43%) Gaps:163/775 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 TAEINKLLAESPLEKNVT--C-GFWIFKGTFYQRFANQTAYV--LLYGIVGCIFSMTYAYFNGTI 135
            |.:..|.....|.....|  | ||.:|..      |...:|:  .|.|:|          ...:|
  Rat     4 TQQSRKAAEAQPSRSKQTRFCDGFKLFLA------ALSFSYICKALGGVV----------MKSSI 52

  Fly   136 TTIEKRFKIPSKNTGIISVGNDISQTLVSAVLAYYAGKGHRPRWIGFGLLTIVFFCILTTAPHFL 200
            |.||:||.|||..:|:|..|.:|...||...::|:..|.|||:.||.|...:....|||..|||.
  Rat    53 TQIERRFDIPSSISGLIDGGFEIGNLLVIVFVSYFGSKLHRPKLIGIGCFIMGIGSILTALPHFF 117

  Fly   201 YGPGEDALALTSEFGGMPDENATMEA-IEEQRSKTLCRLNGGGAE-----CEVGEGNFAPQLLLF 259
            .|..:  .|..::.|.:  .|:|:.. |.:..|.|     |...|     ||.|   ....:.::
  Rat   118 MGYYK--YAKENDIGSL--GNSTLTCFINQMTSPT-----GPSPEIVEKGCEKG---LKSHMWIY 170

  Fly   260 V--AQFISGIGGSLYYTLGVSYMDDNTKKSKTPALLSLSYFLRMLGPAIGYALASFCLRLYI--- 319
            |  ...:.|||.:....||:||:||..|:..|...|...:.:.|:||.:|:.::|...::|:   
  Rat   171 VLMGNMLRGIGETPIVPLGISYLDDFAKEGHTSMHLGTLHTIAMIGPILGFIMSSVFAKIYVDVG 235

  Fly   320 APQMHPV-INNKDPRWLGAWWLGWLVMGGLLSFSGVFLSMFPKELPRAVARRKVEENRRREKERL 383
            ...::.| |...|.||:|||||.::|.|.|...|.:.....||     :.:|..||  |:....|
  Rat   236 YVDLNSVRITPNDARWVGAWWLSFIVNGLLCITSSIPFFFLPK-----IPKRSQEE--RKNSVSL 293

  Fly   384 SVKSTEKER-----LTAELDQKTTAEAKASFQDMLKTFRRLITNKTYMCNTLSSIFYLVGYTPYW 443
            ....|::|:     ||.:.:|.     .::....|::.|.::||:.|:...:.::..:.|:...:
  Rat   294 HAPKTDEEKKHMTNLTKQEEQD-----PSNMTGFLRSLRSILTNEIYVIFLILTLLQVSGFIGSF 353

  Fly   444 IFTPKYIEVQYRQSAATSSMVTGTVALAFSAVGVLLSGFIISRYKPRARYMAAWNVIVGFLTVAG 508
            .:..|:||.|:.::|:.::.:.|.:.:...|..:.|.|:|:.::|               ||..|
  Rat   354 TYLFKFIEQQFGRTASQANFLLGIITIPTMATAMFLGGYIVKKFK---------------LTSVG 403

  Fly   509 I---------LAYAF------IGCPGNESSVI------VNIHDSSLAGNTTTCNSACSCDYVRYS 552
            |         :||||      :.|.....:.:      :|..||.:....:.|||.||||..::.
  Rat   404 IAKFVFFTSSVAYAFQFLYFPLLCENKPFAGLTLTYDGMNPVDSHIDVPLSYCNSDCSCDKNQWE 468

  Fly   553 PVCGENNMTYISACHAGCK-----KLLVNSEGKKIFYDCSCIPSDDAGNSTSQFKRLTSFDLSND 612
            |:||||.:||||.|.||||     |...|:|    |||||||                    || 
  Rat   469 PICGENGVTYISPCLAGCKSFRGDKKPNNTE----FYDCSCI--------------------SN- 508

  Fly   613 EVSQNTSVHSQLEALANGQAMPGACP-VNCWTQFVAFLAVMCCLKFVGASGRASNFLVSVRCVPE 676
              |.|.|.|.            |.|| ..|.|.:..::.:...:.|..|.|..|..|:.::.|..
  Rat   509 --SGNNSAHL------------GECPRYKCKTNYYFYIILQVTVSFFTAMGSPSLILILMKSVQP 559

  Fly   677 KDKTAAMGFGMTLCSMLAFIPSPIFFGWVFDRVCLVWGKT-CTNKGNCWLYDP-------LSMRY 733
            :.|:.||||...:...|..|.:||::|...||.|:.|..| |..:|.|.||:.       |.:..
  Rat   560 ELKSLAMGFHSLIIRALGGILAPIYYGAFIDRTCIKWSVTSCGKRGACRLYNSRLFGFSYLGLNL 624

  Fly   734 TLNFTAAVFIAIGAIFDLGVWYYAKDLKIFD-----------EDVKEVEMKIVQHEEEAN 782
            .|. |..:|:.:..|:.....|...|.|..:           :.|.:.....|.::|::|
  Rat   625 ALK-TPPLFLYVVLIYFTKRKYKRNDNKTLENGRQFTDEGNPDSVNKNGYYCVPYDEQSN 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp58DcNP_001097409.1 OATP 112..731 CDD:281175 189/672 (28%)
MFS 114..>518 CDD:119392 115/437 (26%)
KAZAL_SLC21 537..590 CDD:238650 30/57 (53%)
Slco1b2NP_113838.1 MFS 28..555 CDD:421695 169/620 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..311 7/26 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1029129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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