DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp58Dc and slco1f2

DIOPT Version :9

Sequence 1:NP_001097409.1 Gene:Oatp58Dc / 37545 FlyBaseID:FBgn0034716 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001121745.2 Gene:slco1f2 / 100190901 ZFINID:ZDB-GENE-080305-3 Length:662 Species:Danio rerio


Alignment Length:661 Identity:192/661 - (29%)
Similarity:302/661 - (45%) Gaps:123/661 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 VLLYGIVGCIF--SMTYAYFNGTITTIEKRFKIPSKNTGIISVGNDISQTLVSAVLAYYAGKGHR 176
            :.:..:..|.|  |||.:|...|||.||:||:|||...|||..|.::...||..:::|...|.||
Zfish    29 IFIAALAFCYFSKSMTASYTKSTITQIERRFEIPSSTVGIIDGGFEMGNMLVITLVSYVGAKFHR 93

  Fly   177 PRWIGFGLLTIVFFCILTTAPHFLYGPGE--DALALTSEFGGMPDENATMEAIEEQRSKTLCRLN 239
            |:.||.|:|.:....:|..:|||:.|..:  .|...|::.|..    ..:........|||.:..
Zfish    94 PKIIGAGVLLMGIGTLLMASPHFIMGRYKYGTAATHTNDAGNF----TVISTCSSDSQKTLQQPF 154

  Fly   240 GGGAECEVGEGNFAP-QLLLFVAQFISGIGGSLYYTLGVSYMDDNTKKSKTPALLSLSYFLRMLG 303
            .|   |...|...:| .:::.:...:.|||.:....||:|::||..:...:...:.....::.:|
Zfish   155 SG---CRKEEAESSPLWVIVVLGNTMLGIGEASIIPLGMSFVDDYARPENSAFYIGCLNTIKGIG 216

  Fly   304 PAIGYALASFCLRLYI----APQMHPVINNKDPRWLGAWWLGWLVMGGLLSFSGVFLSMF-PKEL 363
            |..|:.|.|.|..||:    ..:....|..:|.||:||||||: |:.|||:....|...| ||.|
Zfish   217 PIFGFVLGSLCANLYVDIGLVNKESVTITPQDSRWVGAWWLGY-VVSGLLTVLAAFPFWFLPKAL 280

  Fly   364 PRAVARRKVEENRRREKERLSVKSTEKERLTAELDQKTTAEAKASFQDMLKTFRRLITNKTYMCN 428
            |              |..::|:.....::      .|||.......:|...||:||:|||.|:  
Zfish   281 P--------------ENSQISLLDNTPQQ------HKTTPSLTEIVKDFAPTFKRLLTNKIYI-- 323

  Fly   429 TLSSIFYLVGYTPYWI---FTPKYIEVQYRQSAATSSMVTGTVALAFSAVGVLLSGFIISRYKPR 490
             |...:.:|.:..:.|   :||||:|.|:.|||:.::.:.|...:...|:||.|||.::.|:|  
Zfish   324 -LYLAYSIVAFNDFAILVTYTPKYLEQQFGQSASKANFLIGVTCVPAVALGVFLSGLMMKRFK-- 385

  Fly   491 ARYMAAWNVI----VGFLTVAGILAYAFIGCPGNESSVIVNIHDSSLAGNTT------------- 538
                  |.::    |..||   |:|..|:..|    ...::..:..:||.|.             
Zfish   386 ------WGLLASARVNLLT---IVATVFLTVP----FFALSCENLDIAGVTVPYQGSTEVQGVTS 437

  Fly   539 ----TCNSACSCDYVRYSPVCGENNMTYISACHAGCKKLLVNSEG---KKIFYDCSCIPSDDAGN 596
                :||:.|.|..:.:.||||||.:||||.|||||.    :::|   .|.|:||.||       
Zfish   438 DVLPSCNADCGCPDLHWDPVCGENGVTYISPCHAGCS----STQGAGRNKTFHDCGCI------- 491

  Fly   597 STSQFKRLTSFDLSNDEVSQNTSVHSQLEALANGQAMPGACP--VNCWTQFVAFLAVMCCLKFVG 659
                    .|:.||                :.|..|:.|.|.  .||......:|.:.....||.
Zfish   492 --------QSWGLS----------------VGNSSAVLGQCSQNPNCNRMMYLYLGLQSLALFVY 532

  Fly   660 ASGRASNFLVSVRCVPEKDKTAAMGFGMTLCSMLAFIPSPIFFGWVFDRVCLVWG--KTCTNKGN 722
            :.|....|.:|:|.|..:.|:.::|..:....:|..||:||:||.:.|..||.||  |:| .:|.
Zfish   533 SLGAVPLFTMSLRIVDPELKSLSVGVLLLSIRVLGGIPAPIYFGALVDSSCLKWGQRKSC-GRGA 596

  Fly   723 CWLYDPLSMRY 733
            |.:||..:.|:
Zfish   597 CRIYDIETFRF 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp58DcNP_001097409.1 OATP 112..731 CDD:281175 191/657 (29%)
MFS 114..>518 CDD:119392 124/420 (30%)
KAZAL_SLC21 537..590 CDD:238650 26/72 (36%)
slco1f2NP_001121745.2 OATP 29..605 CDD:281175 191/657 (29%)
MFS 31..>413 CDD:119392 125/427 (29%)
KAZAL_SLC21 440..492 CDD:238650 26/70 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D434101at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.