DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oatp58Dc and slco1f3

DIOPT Version :9

Sequence 1:NP_001097409.1 Gene:Oatp58Dc / 37545 FlyBaseID:FBgn0034716 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001129156.2 Gene:slco1f3 / 100190900 ZFINID:ZDB-GENE-080212-5 Length:588 Species:Danio rerio


Alignment Length:605 Identity:177/605 - (29%)
Similarity:274/605 - (45%) Gaps:97/605 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 VGNDISQTLVSAVLAYYAGKGHRPRWIGFGLLTIVFFCILTTAPHFLYGPGEDALALTSEFGGMP 218
            :||.:..||||    |...|.|||:.||.|:|.:....:|..:|||:.|......|.|..   ..
Zfish     1 MGNILVITLVS----YVGAKFHRPKIIGAGVLLMGIGTLLMASPHFIMGRYRYGTAATHT---ND 58

  Fly   219 DENAT-MEAIEEQRSKTLCRLNGGGAECEVGEGNFAP-QLLLFVAQFISGIGGSLYYTLGVSYMD 281
            |.|.| :........:||.:...|   |:..|...:| .:::.:...:.|||.:....||:|::|
Zfish    59 DGNFTVISTCSSDSQETLQKPFSG---CQKEESGRSPLWVMVLLGNTMRGIGEASIVPLGMSFID 120

  Fly   282 DNTKKSKTPALLSLSYFLRMLGPAIGYALASFCLRLYI----APQMHPVINNKDPRWLGAWWLGW 342
            |..:...:...:.....|.::||..|:.|.|.|..||:    ..|....|..:|.||:||||||:
Zfish   121 DYARPENSAFYIGCLNTLGVIGPIFGFMLGSLCANLYVDIDSVYQASVTITPQDYRWVGAWWLGY 185

  Fly   343 LVMGGLLSFSGVF-LSMFPKELPRAVARRKVEENRRREKERLSVKSTEKERLTAELDQKTTAEAK 406
             |:.||.:....| |..||:.||              |..::|..:..:::      .|||....
Zfish   186 -VVSGLFTLLAAFPLWFFPRALP--------------ENSQISELNHPRQQ------HKTTPSLT 229

  Fly   407 ASFQDMLKTFRRLITNKTYMCNTLSSIFYLVGYTPYWI---FTPKYIEVQYRQSAATSSMVTGTV 468
            ...:|...:|:.|:|||.|:.....||   |.:..:.|   :||||:|.|:.|||:.::.:.|..
Zfish   230 EIVKDFPPSFKHLLTNKIYILYLAHSI---VAFNDFAIGASYTPKYLEQQFGQSASKTNFLIGAT 291

  Fly   469 ALAFSAVGVLLSGFIISRYKPRARYMAAWNVIVG----FLTV------AGILAYAFIGCPGNESS 523
            ::...|:|:.|||.::.|:|......|..|:..|    ||.|      .|.|..|.:..|...|:
Zfish   292 SVPAVALGIFLSGLMMKRFKWDLLTSARVNLYAGVAMLFLAVPFFALSCGNLEVAGVTVPYQGST 356

  Fly   524 VIVNIHDSSLAGNTTTCNSACSCDYVRYSPVCGENNMTYISACHAGCKKLLVNSEGKKI-FYDCS 587
            .:..:....|    .:||:.|.|..:.:.||||||.:||||.|||||...|  ..|:.: |:||.
Zfish   357 EVQGVISDVL----PSCNADCGCPDIHWDPVCGENGVTYISPCHAGCNSTL--GAGRNMTFHDCG 415

  Fly   588 CIPSDDAGNSTSQFKRLTSFDLSNDEVSQNTSVHSQLEALANGQAMPGAC--PVNCWTQFVAFLA 650
            ||               .|:.||                :.|..|:.|.|  ...|...|..:|.
Zfish   416 CI---------------QSWGLS----------------VGNSSAVLGQCSRDPKCNRMFYIYLG 449

  Fly   651 VMCCLKFVGASGRASNFLVSVRCVPEKDKTAAMGFGMTLCSMLAFIPSPIFFGWVFDRVCLVWGK 715
            :.....||.:.|....|.:|:|.|..:.|:.::|..:....:|..||:||:||.:.|..||.||:
Zfish   450 LQSLAFFVYSLGTVPYFTLSLRIVDPELKSISVGMLLFTVRVLGGIPAPIYFGSLIDSTCLKWGR 514

  Fly   716 T--CTNKGNCWLYDPLSMRY 733
            |  | .:|.|.:||..:.|:
Zfish   515 TKSC-GRGACRIYDIETFRF 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp58DcNP_001097409.1 OATP 112..731 CDD:281175 176/601 (29%)
MFS 114..>518 CDD:119392 110/383 (29%)
KAZAL_SLC21 537..590 CDD:238650 25/53 (47%)
slco1f3NP_001129156.2 OATP 1..531 CDD:281175 176/601 (29%)
MFS <88..>339 CDD:119392 77/274 (28%)
KAZAL_SLC21 366..418 CDD:238650 27/72 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D434101at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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