DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp58Db and Slco1a5

DIOPT Version :9

Sequence 1:NP_611658.3 Gene:Oatp58Db / 37544 FlyBaseID:FBgn0034715 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_110465.1 Gene:Slco1a5 / 80900 RGDID:70985 Length:670 Species:Rattus norvegicus


Alignment Length:655 Identity:162/655 - (24%)
Similarity:286/655 - (43%) Gaps:92/655 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VADDEKRLNSSDTTCGFSIFRGPALQRFATAHMFVIVYGIASCFLAMAFTYFTGTITTMEKRFNI 85
            :.:.|||:.:.:..|            |:...||::....|....:::..|....:|.:|::|:|
  Rat     1 MGETEKRVATHEVRC------------FSKIKMFLLALTWAYVSKSLSGIYMNTMLTQIERQFDI 53

  Fly    86 PTKISGLITVGNDISTVFSSAFLSYYASRGHRPRWVALGLIIIAIFCLLMLTPHIFYGPGEEALR 150
            ||.|.|.|....:|..:....|:||:.::.|||..:.:|.:|:.:.|.||..||...|       
  Rat    54 PTSIVGFINGSFEIGNLLLIIFVSYFGTKLHRPIMIGVGCVIMGLGCFLMSLPHFLMG------- 111

  Fly   151 LTEEYGMSESFGASLNITEKNDSLCHEKNSNCLERAGDYTPIV-----LFFIAQFIG----GIGC 206
               .|....:...:.|:: .|..||.|..|..|:...|....:     |.:|...:|    |||.
  Rat   112 ---RYEYETTISPTSNLS-SNSFLCMENRSQTLKPTQDPAECIKEMKSLMWIYVLVGNIIRGIGE 172

  Fly   207 SLFYAPGLSYMDDNSASSKTPAMLSWSSFLRMLGPAMGFSMVSLCLRLYIDP----FKKPLITTN 267
            :.....|:||::|.:.|..:|..:......::.||.:|..:.|.|..:|:|.    .....||..
  Rat   173 TPIMPLGISYIEDFAKSENSPLYIGILETGKVFGPIVGLLLGSFCASIYVDTGSVNTDDLTITPT 237

  Fly   268 DPRWMGAWWIGWILLTFILTISAVFVGMFPKEMP--------------RAKARRLKADGEEDIPL 318
            |.||:||||||:::...:..:|::....|||.:|              :.:..|.||. ||:..:
  Rat   238 DTRWVGAWWIGFLICAGVNILSSIPFFFFPKTLPKEGLQDDVDGTNNDKEEKHREKAK-EENRGI 301

  Fly   319 AGRSFQDMLDSLKRLASNKVYVYNMLASILYLFGYMPYWIFTPKYIEIQYRQSASTSTMATGTWA 383
            .    :|.|..:|.|:.|.:|:..:|.|:|.:..::..:.|.|||:|.||.:|.:...:..|.:.
  Rat   302 T----KDFLPFMKSLSCNPIYMLLILTSVLQINAFINMFTFLPKYLEQQYGKSTAEVVLLIGVYN 362

  Fly   384 LGFSAAGILISGYVISKYKPSARAMAAWNFVVDYLTVAGMLCYVLVGCDESDRANSLSIVPTG-- 446
            |.....|.|:.|:::.|:|.:.:..|...|.:..........:.::.||....| .|:....|  
  Rat   363 LPPICIGYLLIGFIMKKFKITVKKAAYMAFCLSLFEYLLYFLHFMITCDNFPVA-GLTASYEGVH 426

  Fly   447 ----------DSCSASCVCEYVYYAPVCSPENITFISACHAGCTDKAINELGKTIYTGCRCM--- 498
                      ..|:..|.|....:.|||....:.::|||.||| .|::......::..|.|:   
  Rat   427 HPLYVENKVLADCNRGCSCSTNSWDPVCGDNGLAYMSACLAGC-KKSVGTGTNMVFQNCSCIRSS 490

  Fly   499 GNVSSIISLSNVTSLASQSQIAMDGACP--VDCNKQFLIFLAVMCFLKFVGATGRSSNLLLALRC 561
            ||.|:::                 |.|.  .:|..:...||.:.....|:.:.......::.|||
  Rat   491 GNSSAVL-----------------GLCKKGPECANKLQYFLIMSVIGSFIYSITAIPGYMVLLRC 538

  Fly   562 VPSKDKTFSLGFGSMVYSVLAFIPSPIVFGWMLDSYCLVWGK-TCSSKGNCWIYDTKSLRYTMNL 625
            :..::|:..:|..:....|.|.||:||.||.::|..||.||. .|...|.|.:|:..:.|....:
  Rat   539 IKPEEKSLGIGLHAFCTRVFAGIPAPIYFGALIDRTCLHWGTLKCGEPGACRMYNINNFRRIYLV 603

  Fly   626 VCASL 630
            :.|:|
  Rat   604 LPAAL 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp58DbNP_611658.3 OATP 53..619 CDD:281175 154/610 (25%)
MFS 55..>410 CDD:119392 99/381 (26%)
KAZAL_SLC21 447..499 CDD:238650 15/54 (28%)
Slco1a5NP_110465.1 oat 1..625 CDD:273279 162/655 (25%)
MFS 21..>397 CDD:119392 103/391 (26%)
KAZAL_SLC21 436..487 CDD:238650 14/51 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1029129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.