DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oatp58Db and slco1c1

DIOPT Version :9

Sequence 1:NP_611658.3 Gene:Oatp58Db / 37544 FlyBaseID:FBgn0034715 Length:680 Species:Drosophila melanogaster
Sequence 2:XP_005164528.1 Gene:slco1c1 / 562772 ZFINID:ZDB-GENE-041210-50 Length:710 Species:Danio rerio


Alignment Length:629 Identity:180/629 - (28%)
Similarity:297/629 - (47%) Gaps:70/629 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 MFVIVYGIASCFLAMAFTYFTGTITTMEKRFNIPTKISGLITVGNDISTVFSSAFLSYYASRGHR 117
            ||::....|....|::.:|...|||.:|:||:||:.:.|:|....:|..:...||:||:.::.||
Zfish    48 MFLVALSFAYFSKALSGSYMKSTITQLERRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKLHR 112

  Fly   118 PRWVALGLIIIAIFCLLMLTPHIFYG--PGEEALRLTEEYGMSESFGASLNITEKNDSLCHEKNS 180
            |:.:|:|.:::::...|:..||...|  ..|.::||:.....|.| ..||:..|.:.|  ...::
Zfish   113 PKIIAIGCLLMSLGTFLIALPHFIIGRYKFETSIRLSVNSSSSLS-PCSLSSAEPSTS--SVPST 174

  Fly   181 NCLERAGDYTPIVLFFIAQFIGGIGCSLFYAPGLSYMDDNSASSKTPAMLSWSSFLRMLGPAMGF 245
            .| |.....:..:..|:...:.|||.:.....|:||:||::........:.....:.::||..|:
Zfish   175 GC-EHESRLSMWIYVFLGNILRGIGETPVQPLGISYIDDHALEENAAFYIGCVQTISVIGPVFGY 238

  Fly   246 SMVSLCLRLYID----PFKKPLITTNDPRWMGAWWIGWILLTFILTISAVFVGMFPKEMPRAKAR 306
            .:.|:|.::|:|    ..:...||..|.||:||||:|:::..||..:|||.....||.:|..:.|
Zfish   239 LLGSVCAKIYVDIGFVNMESISITPGDARWVGAWWLGYLIAGFITLLSAVPFWFLPKSLPLPERR 303

  Fly   307 RLKADGE-----EDIPLAGRSFQ------------DMLDSLKRLASNKVYVYNMLASILY---LF 351
            ..|...|     :|..|....:|            |.|.:|:.|..|.||...:..:|:.   |.
Zfish   304 LSKYSPERNSFIKDSALLEHKYQADEPANFLEMAKDFLPTLRSLLGNPVYFLYLCVTIIQFNSLI 368

  Fly   352 GYMPYWIFTPKYIEIQYRQSASTSTMATGTWALGFSAAGILISGYVISKYKPSARAMAAWNFVVD 416
            |.:.|   .|||||..|.||||.:....|...:...|.|:...|.::.|:|.|....|.:.....
Zfish   369 GMVTY---KPKYIEQHYGQSASKANFLMGVINIPAVALGMFSGGVIMKKFKLSIMGAAKFALGTS 430

  Fly   417 YLTVAGMLCYVLVGCDESDRA------NSLSIVPTGD-----SCSASCVCEYVYYAPVCSPENIT 470
            .|.....|.:..:||:.:..|      |....:...|     ||:|:|.|....:.|||..:.:|
Zfish   431 LLGYFLSLFFFSMGCENASVAGITMSYNGTESLFMADGSLRASCNAACHCPEKNWDPVCGEDGLT 495

  Fly   471 FISACHAGCTDKAINELGKTIYTGCRCMGNVSSIISLSNVTSLASQSQIAMDGAC--PVDCNKQF 533
            ::|.|.|||.....:.: .|::..|.|:|       :.|.|:.|        |.|  ...|::.|
Zfish   496 YVSPCLAGCRTSHGSGM-DTVFEQCSCIG-------VGNQTATA--------GQCNNRESCHRIF 544

  Fly   534 LIFLAVMCFLKFVGATGRSSNLLLALRCVPSKDKTFSLGFGSMVYSVLAFIPSPIVFGWMLDSYC 598
            ..|||:.....|:.:.|.:...:|.:||:..:.|:.:|||.::....||.||:||.||.::|:.|
Zfish   545 PYFLALSVITSFIISLGGTPGYMLLIRCIKPQLKSLALGFHTLTTRTLAGIPAPIYFGAIIDTTC 609

  Fly   599 LVWG-KTCSSKGNCWIYDTKSLR-----YTMNLVCAS--LIFLG 634
            |.|| |.|..:|.|.||:|.:.|     .|:.|...|  |..||
Zfish   610 LKWGHKKCGGRGACRIYNTAAYRIAYLGLTLGLRTVSFFLCILG 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp58DbNP_611658.3 OATP 53..619 CDD:281175 173/605 (29%)
MFS 55..>410 CDD:119392 106/380 (28%)
KAZAL_SLC21 447..499 CDD:238650 18/56 (32%)
slco1c1XP_005164528.1 OATP 48..631 CDD:281175 173/605 (29%)
MFS 50..461 CDD:119392 113/417 (27%)
KAZAL_SLC21 470..523 CDD:238650 17/53 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1029129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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