DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oatp58Db and slco1c1

DIOPT Version :9

Sequence 1:NP_611658.3 Gene:Oatp58Db / 37544 FlyBaseID:FBgn0034715 Length:680 Species:Drosophila melanogaster
Sequence 2:XP_031754287.1 Gene:slco1c1 / 100495559 XenbaseID:XB-GENE-6448025 Length:596 Species:Xenopus tropicalis


Alignment Length:579 Identity:154/579 - (26%)
Similarity:254/579 - (43%) Gaps:104/579 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LGLIIIAIFCLLMLTPHIFYGPGEEALRLTEEYGMSESFGASLNIT-----EKNDSLCHEKN--- 179
            :|.:|:|....|:..||.|.|      |.|.|.....|..:|:|::     .:|.::...:|   
 Frog     1 MGCLIMAAGTFLIAMPHFFMG------RYTYERPPVPSANSSINVSPCARDSRNPTVIPTENPHV 59

  Fly   180 ---SNCLERAGDYTPIVLFFIAQFIGGIGCSLFYAPGLSYMDDNSASSKTPAMLSWSSFLRMLGP 241
               :.|.:..|: :..:...:...:.|||.:.....|:||:||.::...|...:.......::||
 Frog    60 NLGTGCDKDFGN-SMWIYVLLGNLLRGIGEAPIQPLGISYIDDYASEDNTAFYIGCVQTSAVIGP 123

  Fly   242 AMGFSMVSLCLRLYID----PFKKPLITTNDPRWMGAWWIGWILLTFILTISAVFVGMFPKEMPR 302
            ..||.:.|||.:|::|    ......||..|.:|:||||:|:::...|:.::.:.....|||.||
 Frog   124 IFGFLLGSLCAKLFVDIGSVNLDSVTITPADAQWVGAWWLGYLIAGGIIVLATIPFWFLPKEQPR 188

  Fly   303 A--------------------KARRLKADGEEDIPLAGRSFQDMLDSLKRLASNKVYVYNMLASI 347
            .                    |....:.||...:.:|    :|.|.|:|.|..|.||...:..|:
 Frog   189 VETGKTPSTPSEQSRFILEEQKEATTEQDGVHLLNMA----KDFLPSVKDLFGNPVYFLYLCGSV 249

  Fly   348 LY---LFGYMPYWIFTPKYIEIQYRQSASTSTMATGTWALGFSAAGILISGYVISKYKPS---AR 406
            ..   |.|.:.|   .|||||.||.|::|.:....|...:...|.||...|.::.:::.:   |.
 Frog   250 FQYNSLIGMVTY---KPKYIEQQYGQTSSKTNFLIGLINIPAVALGIFSGGVIMKRFRINILGAA 311

  Fly   407 AMAAWNFVVDYLTVAGMLCYVLVGCDESDRANSLSIVPTGDS-----------CSASCVCEYVYY 460
            .:.....::.||.   :|....:||..|..| .|::...|.:           |:..|.|...::
 Frog   312 KLLLGPSLLGYLV---LLSLFAMGCKNSSVA-GLTVSYQGSAQISYQENEVSECNVGCKCPQTHW 372

  Fly   461 APVCSPENITFISACHAGCTDKAINELGKTI-YTGCRCMGNVSSIISLSNVTSLASQSQ-----I 519
            .|||....:|:.|||.|||  :..|..||.. :..|.|:|              |..||     .
 Frog   373 DPVCGENGLTYYSACFAGC--RVSNGTGKRAEFYNCSCVG--------------APMSQPGGGGS 421

  Fly   520 AMDGACP--VDCNKQFLIFLAVMCFLKFVGATGRSSNLLLALRCVPSKDKTFSLGFGSMVYSVLA 582
            |:.|.|.  .||:..||.|:.......|..:.|.:...:|.|||:..:.|:|:||..::|..|||
 Frog   422 AVAGPCARGTDCSNMFLYFVVTSVMTSFALSLGGTPGYMLLLRCIKPELKSFALGIYTLVIRVLA 486

  Fly   583 FIPSPIVFGWMLDSYCLVW-GKTCSSKGNCWIYDTKSLRYTMNLVCASLIFLGSFWNIG 640
            .||:|:..|.::|:.||.| .::|:.:|.|..|:|.:.||         |:||....:|
 Frog   487 GIPAPMYLGALIDTVCLRWSSRSCAGRGACRFYNTDAFRY---------IYLGMTLALG 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp58DbNP_611658.3 OATP 53..619 CDD:281175 148/556 (27%)
MFS 55..>410 CDD:119392 82/327 (25%)
KAZAL_SLC21 447..499 CDD:238650 18/63 (29%)
slco1c1XP_031754287.1 MFS 1..465 CDD:421695 125/497 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D434101at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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