DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oatp58Db and slco4c1

DIOPT Version :9

Sequence 1:NP_611658.3 Gene:Oatp58Db / 37544 FlyBaseID:FBgn0034715 Length:680 Species:Drosophila melanogaster
Sequence 2:XP_002933490.4 Gene:slco4c1 / 100485817 XenbaseID:XB-GENE-983309 Length:783 Species:Xenopus tropicalis


Alignment Length:665 Identity:190/665 - (28%)
Similarity:313/665 - (47%) Gaps:70/665 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEIEASKFLKDKEAGINVADDEK--RLNSS------------DTTCGFSIFRGPALQRFATAHMF 54
            |.:|...|....|.|:...|.:|  ...||            :..||:..|....:|.......:
 Frog   112 EGVENPSFSCAGEVGLKDLDSKKVEEPESSPSLAVASGEEYKEGPCGWGSFTPSCVQCCNNPKGY 176

  Fly    55 VIVYGIASCFLAMAFTYFTG----TITTMEKRFNIPTKISGLITVGNDISTVFSSAFLSYYASRG 115
            :::|   |....|..|...|    .|:|:||||::.:.::|||....||:....|.|:|:|..||
 Frog   177 LVMY---SLLAVMQGTAVNGLVNVVISTIEKRFDLNSSLTGLIAASYDIAFCLLSLFVSFYGQRG 238

  Fly   116 HRPRWVALGLIIIAIFCLLMLTPHIFYGPGEEALRLTEEYGMSESFGASLNITEKNDSLCHEKNS 180
            |:|||:|...::|.:..|:...|:.|.|        ..|||...|  ....::..:.||     .
 Frog   239 HKPRWLAFSALMIGLGSLVFSIPNFFSG--------IYEYGNKVS--DFCEVSGNSSSL-----Q 288

  Fly   181 NCLERAGDYTPIVLFFIAQFIGGIGCSLFYAPGLSYMDDNSASSKTPAMLSWSSFLRMLGPAMGF 245
            ||...:.....:.:|.:.|.:.|:|.:..|..|.:|.||:....|:...:..:..:.::|||:|:
 Frog   289 NCSAGSSQSYFLYVFVLGQLLMGVGGTPLYTLGTAYFDDSLPPHKSSLYIGIAYGMSVVGPAIGY 353

  Fly   246 SMVSLCLRLYIDPFK--KPLITTNDPRWMGAWWIGWILLTFILTISAVFVGMFPKEMP---RAKA 305
            .:....|.:|||..|  ...||..||||:||||||:::...:..:.......|||.:|   :.::
 Frog   354 LVGGQLLNIYIDIDKGQSVNITETDPRWLGAWWIGFLICGLVTWLLIAPFSCFPKHLPGTEKMQS 418

  Fly   306 RRLKA---DGEEDIPLA---GRSFQDMLDSLKRLASNKVYVYNMLASILYLFGYMPYWIFTPKYI 364
            .|:..   :|.|.|..:   |:||:|...:|..|..|.|.:....||....|....:..|.||:|
 Frog   419 ERISQAHNNGSESIVESKNLGKSFKDFPLALLLLVKNPVLISLTFASCFDAFITTAFAAFLPKFI 483

  Fly   365 EIQYRQSASTSTMATGTWALGFSAAGILISGYVISKYKPSARAMAAWNFVVDYLTVAGMLCYVLV 429
            |.|:..::|.|.:..|...:..:|.|.::.|.::||.|...:.:..::.::..:::|....::..
 Frog   484 ENQFSLTSSFSAILGGGVLIPAAAIGQVLGGVIVSKCKFDCKNIIKFSIIITVISLALASVFIFA 548

  Fly   430 GCDESDRAN-SLSIVPTGD------SCSASCVCEYVYYAPVCSPENITFISACHAGCTDKAINEL 487
            .|.....|. |:....||.      .|:::|.|...:|.|||..:.:.:.|:|:||||....|:.
 Frog   549 RCGNDPFAGVSVQYNGTGKIGELDAPCNSNCSCARFFYDPVCGSDGVQYFSSCYAGCTSVEYNDK 613

  Fly   488 GKTIYTGCRCMGNVSSIISLSNVTSLASQSQIAMDGACPVDCNK--QFLIFLAVMCFLKFVGATG 550
            || ||..|.|:.:.:....: ||||.|.|      |.|...||.  .|::|...:....|:.||.
 Frog   614 GK-IYGNCSCIASHTGEFGV-NVTSQAEQ------GKCEAKCNNLITFMVFFFFVVVATFMTATP 670

  Fly   551 RSSNLLLALRCVPSKDKTFSLGFGSMVYSVLAFIPSPIVFGWMLDSYCLVWG-KTCSSKGNCWIY 614
            .:   :..|||||.|.::|:||....:..:|..||.|||||.::||.|::|. ..|..:|.||.|
 Frog   671 IT---MAILRCVPDKQRSFALGVQWSLIRLLGSIPGPIVFGVVIDSSCILWNINECGVEGACWTY 732

  Fly   615 DTKSLRYTMNLVCAS 629
              |:...::|||..|
 Frog   733 --KNSEMSLNLVFIS 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp58DbNP_611658.3 OATP 53..619 CDD:281175 173/590 (29%)
MFS 55..>410 CDD:119392 105/369 (28%)
KAZAL_SLC21 447..499 CDD:238650 20/57 (35%)
slco4c1XP_002933490.4 MFS_SLCO4C_OATP4C 173..677 CDD:341021 146/532 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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