DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp58Da and slco1f3

DIOPT Version :10

Sequence 1:NP_611657.2 Gene:Oatp58Da / 37543 FlyBaseID:FBgn0050277 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_073801545.1 Gene:slco1f3 / 100190900 ZFINID:ZDB-GENE-080212-5 Length:659 Species:Danio rerio


Alignment Length:685 Identity:193/685 - (28%)
Similarity:318/685 - (46%) Gaps:79/685 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EGEDGGKDTYCGFWIFKGPSMQRFATEHMYVILYGLAGCVM--TMTFAYFNGTITTLEKRYKIPT 101
            |..|..:.|.|             .:..:.:.:..||.|..  ::|..|...|||.:|:|::||:
Zfish     9 EYSDRNQKTKC-------------CSTSLKIFIGALAFCYFSKSLTGFYTKSTITQIERRFEIPS 60

  Fly   102 KVSGIISVGNDISTMLTAAILGYYAGHRHRPRWMGIGLLTIVAFCLLTSSLHFL-----YGAGED 161
            ...|||....::..:|...::.|.....|||:.:|.|:|.:....||.:|.||:     ||.   
Zfish    61 STVGIIDGSFEMGNILVITLVSYVGAKFHRPKIIGAGVLLMGIGTLLMASPHFIMGRYRYGT--- 122

  Fly   162 ALQLTREFGQVNETLTNQERDKKLCQPTAGGCVQEEVG---LWVPQVFLFAAQLISGVGQALFYT 223
            |...|.:.|......|.....::..|....||.|||.|   ||   |.:.....:.|:|:|....
Zfish   123 AATHTNDAGNFTVISTCSSDSQETLQKPYSGCQQEESGRSPLW---VMVLLGNAMRGIGEASIVP 184

  Fly   224 LGIAYMDDNTSKAKTPAMLSMSTFLRMLGPAIGYSLAAVCLRLYIE--------PTLEPLIGQED 280
            ||::::||......:...:.....|.::||..|:.|.::|..||::        .|:.|    :|
Zfish   185 LGMSFIDDYARPENSAFYIGCLNTLGVIGPIFGFMLGSLCANLYVDIDSVFQASVTITP----QD 245

  Fly   281 PRWLGAWWLGWLVLAAITLVSAILLFMFPKQLPSARKRRLQLKQDERKQSLPLNERSLADMMKTV 345
            .||:||||||::|...:||::|..|:.||:.||...:........::.:::|.....:.|...:.
Zfish   246 SRWVGAWWLGYVVSGLLTLLAAFPLWFFPRALPENSQISELNHPPQQHKTIPSLTEIVKDFPPSF 310

  Fly   346 KKLSKNKVYVYNTMASILYFFGYMVYWIFTPKYIETQYRQSAAMATMATGTVALGFSAAGILISG 410
            |.|..||:|:.....||:.|..:.:...:||||:|.|:.|||:......|..::...|.||.:||
Zfish   311 KHLLTNKIYILYLAHSIVAFNDFAIGASYTPKYLEQQFGQSASKTNFLIGATSVPGVALGIFLSG 375

  Fly   411 YVISKYK----PSARAMAAWNAIVDFVTVAGILCYVAIGCEGSDRLNTLTTLSAGN--------- 462
            .::.::|    .|||........:.|:.|.    :.|:.| |:..:..:|....|:         
Zfish   376 LMMKRFKWDLLTSARVNLYAGVAMLFLAVP----FFALSC-GNLEVAGVTVPYQGSKEVQGVISD 435

  Fly   463 ---SCSASCHCDYVHYAPVCSADNITFISACHAGCSERTKDALGRTIYTGCECLGSSSLNSEPES 524
               ||:..|.|..:|:.|||..:.:|:||.||||||. |:.|.....:..|.|:.|..|:....|
Zfish   436 VLPSCNDDCGCPDIHWDPVCGENGVTYISPCHAGCSS-TQGAGRNMTFHDCRCIQSWGLSVGNSS 499

  Fly   525 QFAVDGTCPVD--CFNEFLIFLGVMCFLKLVGASSKSTNLLLALRCMPPDEKTFALGLGSMAASL 587
              ||.|.|..|  |...|.|:||:......|.:........|:||.:.|:.|:.::|:......:
Zfish   500 --AVLGQCSRDPKCNRMFYIYLGLQSLAFFVYSLGTVPYFTLSLRIVDPELKSISVGMLLFTVRV 562

  Fly   588 LGFIPSPIFFGWLIDNYCLVWGKTCS-NKGNCWLYDTKSMRYALNLSAAFFIFLGGFLNIAVW-Y 650
            ||.||:||:||.|||:.||.||:|.| .:|.|.:||.::.|         |:|.|..:.:.|. |
Zfish   563 LGGIPAPIYFGSLIDSTCLKWGRTKSCGRGACRIYDIETFR---------FLFQGLTIGLRVLAY 618

  Fly   651 HAKNLKIFDEEESSPKDSLKNKEVEMKTIDSN-PE 684
            ....:...:.:.....|...:::.|::...|| ||
Zfish   619 SLLWIATIEIQRKMKSDKQLSRDTELQKCPSNDPE 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp58DaNP_611657.2 OATP 67..626 CDD:460821 177/595 (30%)
slco1f3XP_073801545.1 None

Return to query results.
Submit another query.