DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp58Da and slco1f3

DIOPT Version :9

Sequence 1:NP_611657.2 Gene:Oatp58Da / 37543 FlyBaseID:FBgn0050277 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001129156.2 Gene:slco1f3 / 100190900 ZFINID:ZDB-GENE-080212-5 Length:588 Species:Danio rerio


Alignment Length:615 Identity:178/615 - (28%)
Similarity:291/615 - (47%) Gaps:72/615 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 VGNDISTMLTAAILGYYAGHRHRPRWMGIGLLTIVAFCLLTSSLHFL-----YGAGEDALQLTRE 168
            :||    :|...::.|.....|||:.:|.|:|.:....||.:|.||:     ||.   |...|.:
Zfish     1 MGN----ILVITLVSYVGAKFHRPKIIGAGVLLMGIGTLLMASPHFIMGRYRYGT---AATHTND 58

  Fly   169 FGQVNETLTNQERDKKLCQPTAGGCVQEEVG---LWVPQVFLFAAQLISGVGQALFYTLGIAYMD 230
            .|......|.....::..|....||.:||.|   ||   |.:.....:.|:|:|....||::::|
Zfish    59 DGNFTVISTCSSDSQETLQKPFSGCQKEESGRSPLW---VMVLLGNTMRGIGEASIVPLGMSFID 120

  Fly   231 DNTSKAKTPAMLSMSTFLRMLGPAIGYSLAAVCLRLYIE--------PTLEPLIGQEDPRWLGAW 287
            |......:...:.....|.::||..|:.|.::|..||::        .|:.|    :|.||:|||
Zfish   121 DYARPENSAFYIGCLNTLGVIGPIFGFMLGSLCANLYVDIDSVYQASVTITP----QDYRWVGAW 181

  Fly   288 WLGWLVLAAITLVSAILLFMFPKQLP-SARKRRLQLKQDERKQSLPLNERSLADMMKTVKKLSKN 351
            |||::|....||::|..|:.||:.|| :::...|...:.:.|.:..|.| .:.|...:.|.|..|
Zfish   182 WLGYVVSGLFTLLAAFPLWFFPRALPENSQISELNHPRQQHKTTPSLTE-IVKDFPPSFKHLLTN 245

  Fly   352 KVYVYNTMASILYFFGYMVYWIFTPKYIETQYRQSAAMATMATGTVALGFSAAGILISGYVISKY 416
            |:|:.....||:.|..:.:...:||||:|.|:.|||:......|..::...|.||.:||.::.::
Zfish   246 KIYILYLAHSIVAFNDFAIGASYTPKYLEQQFGQSASKTNFLIGATSVPAVALGIFLSGLMMKRF 310

  Fly   417 K----PSARAMAAWNAIVDFVTVAGILCYVAIGCEGSDRLNTLTTLSAGN------------SCS 465
            |    .|||........:.|:.|.    :.|:.| |:..:..:|....|:            ||:
Zfish   311 KWDLLTSARVNLYAGVAMLFLAVP----FFALSC-GNLEVAGVTVPYQGSTEVQGVISDVLPSCN 370

  Fly   466 ASCHCDYVHYAPVCSADNITFISACHAGCSERTKDALGRTI-YTGCECLGSSSLNSEPESQFAVD 529
            |.|.|..:|:.|||..:.:|:||.|||||:...  ..||.: :..|.|:.|..|:....|  ||.
Zfish   371 ADCGCPDIHWDPVCGENGVTYISPCHAGCNSTL--GAGRNMTFHDCGCIQSWGLSVGNSS--AVL 431

  Fly   530 GTCPVD--CFNEFLIFLGVMCFLKLVGASSKSTNLLLALRCMPPDEKTFALGLGSMAASLLGFIP 592
            |.|..|  |...|.|:||:......|.:........|:||.:.|:.|:.::|:......:||.||
Zfish   432 GQCSRDPKCNRMFYIYLGLQSLAFFVYSLGTVPYFTLSLRIVDPELKSISVGMLLFTVRVLGGIP 496

  Fly   593 SPIFFGWLIDNYCLVWGKTCS-NKGNCWLYDTKSMRYALNLSAAFFIFLGGFLNIAVW-YHAKNL 655
            :||:||.|||:.||.||:|.| .:|.|.:||.::.|         |:|.|..:.:.|. |....:
Zfish   497 APIYFGSLIDSTCLKWGRTKSCGRGACRIYDIETFR---------FLFQGLTIGLRVLAYSLLWI 552

  Fly   656 KIFDEEESSPKDSLKNKEVEMKTIDSN-PE 684
            ...:.:.....|...:::.|::...|| ||
Zfish   553 ATIEIQRKMKNDKQLSRDTELQKSPSNDPE 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp58DaNP_611657.2 OATP 67..626 CDD:281175 166/553 (30%)
MFS 69..>425 CDD:119392 97/336 (29%)
KAZAL_SLC21 462..514 CDD:238650 21/64 (33%)
slco1f3NP_001129156.2 OATP 1..531 CDD:281175 166/553 (30%)
MFS <88..>339 CDD:119392 74/262 (28%)
KAZAL_SLC21 366..418 CDD:238650 21/53 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D434101at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.