DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ari-2 and AT5G10370

DIOPT Version :10

Sequence 1:NP_477374.1 Gene:ari-2 / 37542 FlyBaseID:FBgn0025186 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_196599.2 Gene:AT5G10370 / 830901 AraportID:AT5G10370 Length:1775 Species:Arabidopsis thaliana


Alignment Length:216 Identity:67/216 - (31%)
Similarity:95/216 - (43%) Gaps:27/216 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 KTTASATPQYRSQMCPVCASSQLGDKFYSL-ACGHSFCKDCWTIYFETQI-----FQGISTQIGC 197
            |:.....|......||:|.|..  |..||| .|.|.|||.|....||..:     |..:.:.|.|
plant  1550 KSALGEKPDEIEVECPICLSEV--DDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDC 1612

  Fly   198 MAQMCNVRVPEDLVLTLVTRPVMRDKYQQF---AFKDYV-KSHPELRFCPGPNCQII--VQSSEI 256
            .|         .:||..:...:.::|..:.   :...:| .|..:.|||..|:|..:  |...:.
plant  1613 GA---------PIVLADMRALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQE 1668

  Fly   257 SAKRAICKACHTGFCFRCGMDYHAPTDCQVIKKWLTKCADDSETANYISA-HTKDCPKCHICIEK 320
            |.:..||.|||:..|.||.::||....|:..||:  |...|....::... :.|:||.|...|||
plant  1669 SGEPFICGACHSEICTRCHLEYHPLITCERYKKF--KENPDLSLKDWAKGKNVKECPICKSTIEK 1731

  Fly   321 NGGCNHMQCFNCKHDFCWMCL 341
            ..|||||:| .|....||.||
plant  1732 TDGCNHMKC-RCGKHICWTCL 1751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-2NP_477374.1 RING-HC_RBR_TRIAD1 152..204 CDD:438429 20/57 (35%)
BRcat_RBR_TRIAD1 231..302 CDD:439005 24/73 (33%)
Rcat_RBR_TRIAD1 306..361 CDD:439021 18/37 (49%)
Ariadne 371..>477 CDD:466073
AT5G10370NP_196599.2 HrpA 304..>756 CDD:441249
OB_NTP_bind 860..937 CDD:400182
RING_Ubox 1561..>1591 CDD:473075 14/31 (45%)
BRcat_RBR 1646..1699 CDD:438996 18/52 (35%)
Rcat_RBR_DEAH12-like 1718..1768 CDD:439036 18/35 (51%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.