DRSC/TRiP Functional Genomics Resources

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Protein Alignment ari-2 and rnf217

DIOPT Version :9

Sequence 1:NP_477374.1 Gene:ari-2 / 37542 FlyBaseID:FBgn0025186 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001076322.1 Gene:rnf217 / 567287 ZFINID:ZDB-GENE-060503-400 Length:543 Species:Danio rerio


Alignment Length:409 Identity:89/409 - (21%)
Similarity:159/409 - (38%) Gaps:97/409 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DDDYDYYNTGEDCDVERLDPKRADPEYFEYECLTV---EDIEKLL-------NERVEKLNTILQI 72
            :|..:....|.|.::..||.:..|.   ..:|.|:   :|||...       |..:: .|..|:.
Zfish   101 EDPKNLEKVGNDINLNDLDHENDDE---RLQCSTINLQQDIESNPELGNPDGNHHID-YNIDLKS 161

  Fly    73 --TPSLAKVLLLEHQWNNVAVV--EKYRQDANALLVTARIKPPSVAVTDTASTSAAAASAQLLRL 133
              .||.:|    ||.:..|..:  :.||     :.|.........:.:.::|:|::::|..:|.|
Zfish   162 GEDPSQSK----EHVYCTVYCIANDNYR-----IPVQKTTSNHETSSSSSSSSSSSSSSPDVLVL 217

  Fly   134 GS-------------------------SGYKTTASATPQYRSQM-CPVCASSQLGDK-FYSL-AC 170
            .|                         ||..::.:|.......: |.:|    |.|| ...| .|
Zfish   218 PSTDLPNLELDNHDPYPVPYTVSDLMVSGIHSSYNADNSLSVVLTCRIC----LDDKQIMPLHCC 278

  Fly   171 GHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPEDLVLTLVTRPVMRDKYQQFAFKDYVKS 235
            ..:.|::|...|..:|:..| ...:.|....|:..:.|:||::.:|...:. ||:.|.....:.|
Zfish   279 KKAVCEECLKRYIISQVHVG-RAHLVCPITECSGFLEENLVISHLTSEELA-KYKYFLELSQLDS 341

  Fly   236 HPELRFCPGPNCQIIV----QSSEISAK-----RAICKACHTGFCFRCGMDYHAPTDC------- 284
            ..:    |.|.|.:..    :|.:.|.|     :..|..|...:||:|...:|....|       
Zfish   342 STK----PCPQCSLFTSLRGRSQQSSTKSEHKYKIQCTKCQFVWCFKCHSPWHEGLKCRDYRKGD 402

  Fly   285 QVIKKWLTKCADDSETANYISAHTKDCPKCHICIEKNGGCNHMQCFNCKHDFCWMCLGDWKTHGS 349
            ::::.|.:........|       :.||:|.|.|::..||:||.|..|..:||:.|       |.
Zfish   403 KLLRHWASVIERGQRNA-------QKCPRCKIHIQRTEGCDHMTCTQCSTNFCYRC-------GE 453

  Fly   350 EYYECSRYKDNPNIANESV 368
            :|.....:.|  :.:|.||
Zfish   454 KYRHLRFFGD--HTSNLSV 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-2NP_477374.1 RING-HC_RBR_TRIAD1 151..204 CDD:319687 14/55 (25%)
IBR 222..284 CDD:214763 16/70 (23%)
rnf217NP_001076322.1 IBR 328..395 CDD:214763 16/71 (23%)
IBR <417..455 CDD:279784 16/51 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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