DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ari-2 and rnf217

DIOPT Version :10

Sequence 1:NP_477374.1 Gene:ari-2 / 37542 FlyBaseID:FBgn0025186 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001076322.1 Gene:rnf217 / 567287 ZFINID:ZDB-GENE-060503-400 Length:543 Species:Danio rerio


Alignment Length:409 Identity:89/409 - (21%)
Similarity:159/409 - (38%) Gaps:97/409 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DDDYDYYNTGEDCDVERLDPKRADPEYFEYECLTV---EDIEKLL-------NERVEKLNTILQI 72
            :|..:....|.|.::..||.:..|.   ..:|.|:   :|||...       |..:: .|..|:.
Zfish   101 EDPKNLEKVGNDINLNDLDHENDDE---RLQCSTINLQQDIESNPELGNPDGNHHID-YNIDLKS 161

  Fly    73 --TPSLAKVLLLEHQWNNVAVV--EKYRQDANALLVTARIKPPSVAVTDTASTSAAAASAQLLRL 133
              .||.:|    ||.:..|..:  :.||     :.|.........:.:.::|:|::::|..:|.|
Zfish   162 GEDPSQSK----EHVYCTVYCIANDNYR-----IPVQKTTSNHETSSSSSSSSSSSSSSPDVLVL 217

  Fly   134 GS-------------------------SGYKTTASATPQYRSQM-CPVCASSQLGDK-FYSL-AC 170
            .|                         ||..::.:|.......: |.:|    |.|| ...| .|
Zfish   218 PSTDLPNLELDNHDPYPVPYTVSDLMVSGIHSSYNADNSLSVVLTCRIC----LDDKQIMPLHCC 278

  Fly   171 GHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPEDLVLTLVTRPVMRDKYQQFAFKDYVKS 235
            ..:.|::|...|..:|:..| ...:.|....|:..:.|:||::.:|...:. ||:.|.....:.|
Zfish   279 KKAVCEECLKRYIISQVHVG-RAHLVCPITECSGFLEENLVISHLTSEELA-KYKYFLELSQLDS 341

  Fly   236 HPELRFCPGPNCQIIV----QSSEISAK-----RAICKACHTGFCFRCGMDYHAPTDC------- 284
            ..:    |.|.|.:..    :|.:.|.|     :..|..|...:||:|...:|....|       
Zfish   342 STK----PCPQCSLFTSLRGRSQQSSTKSEHKYKIQCTKCQFVWCFKCHSPWHEGLKCRDYRKGD 402

  Fly   285 QVIKKWLTKCADDSETANYISAHTKDCPKCHICIEKNGGCNHMQCFNCKHDFCWMCLGDWKTHGS 349
            ::::.|.:........|       :.||:|.|.|::..||:||.|..|..:||:.|       |.
Zfish   403 KLLRHWASVIERGQRNA-------QKCPRCKIHIQRTEGCDHMTCTQCSTNFCYRC-------GE 453

  Fly   350 EYYECSRYKDNPNIANESV 368
            :|.....:.|  :.:|.||
Zfish   454 KYRHLRFFGD--HTSNLSV 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-2NP_477374.1 RING-HC_RBR_TRIAD1 152..204 CDD:438429 14/54 (26%)
BRcat_RBR_TRIAD1 231..302 CDD:439005 15/86 (17%)
Rcat_RBR_TRIAD1 306..361 CDD:439021 17/54 (31%)
Ariadne 371..>477 CDD:466073
rnf217NP_001076322.1 vRING-HC-C4C4_RBR_RNF217 261..309 CDD:438284 13/52 (25%)
BRcat_RBR_RNF217 340..410 CDD:439003 15/73 (21%)
Rcat_RBR_RNF217 415..482 CDD:439011 21/72 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.