DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ari-2 and rnf216

DIOPT Version :10

Sequence 1:NP_477374.1 Gene:ari-2 / 37542 FlyBaseID:FBgn0025186 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_012825892.2 Gene:rnf216 / 549588 XenbaseID:XB-GENE-1014321 Length:886 Species:Xenopus tropicalis


Alignment Length:313 Identity:73/313 - (23%)
Similarity:117/313 - (37%) Gaps:84/313 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 QYR--SQM--CPVCASSQLGDKFYSLACGHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVP 207
            ||.  .||  |..|..|...::....|.||.|||:|...|.:...|.....::.||...|....|
 Frog   527 QYEQDGQMIECRCCYGSFAFEELTQCADGHLFCKECLIKYAQEAAFGSGQPKLICMEGTCPCEFP 591

  Fly   208 EDLVLTLVTRPVMRDKYQQFAFKDYVK------------SHPEL------RF-CPGPNCQIIVQS 253
            ...|..::...:::..|::.|.:|...            |.|.|      || ||.|:|      
 Frog   592 TSEVEKVLPENILQKYYERKAEEDISAACADQLVRCPSCSFPALLDKDVDRFSCPNPHC------ 650

  Fly   254 SEISAKRAICKACHTGFCFRCGMDYHAPTDCQVIKKWLTKCADDSETANYISAH-TKDC-PKCHI 316
                 ::..||.|...:      ..|....|:.:.:     :||.....:|... |..| .||||
 Frog   651 -----RKETCKKCQKLW------KEHVNLTCEELAE-----SDDVNYRTFIEEKMTAACVRKCHI 699

  Fly   317 C---IEKNGGCNHMQCFNCKHDFCWMCLGDWKTHGSEYY------------ECSR-------YKD 359
            |   :.|..|||.:.| .|....|::|..  ..:|.:::            ||:|       .:|
 Frog   700 CATELIKAEGCNRLSC-RCGAQICYLCRA--PINGYDHFCQHPHSPGAPCRECTRCSLWTDPSQD 761

  Fly   360 NPNI--------ANESVHVQAREALKKYLHYYERWENHSKSLKLEQQTIDRLR 404
            :..:        .||....:..:|:|:.....::  |.|||.::|  |:.|.|
 Frog   762 DERLILEIQRDAENEQRSRKGEKAVKRIGPPIQK--NPSKSSRIE--TVPRER 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-2NP_477374.1 RING-HC_RBR_TRIAD1 152..204 CDD:438429 16/53 (30%)
BRcat_RBR_TRIAD1 231..302 CDD:439005 17/89 (19%)
Rcat_RBR_TRIAD1 306..361 CDD:439021 20/78 (26%)
Ariadne 371..>477 CDD:466073 10/34 (29%)
rnf216XP_012825892.2 RING-HC_RBR_RNF216 535..591 CDD:438292 15/55 (27%)
BRcat_RBR_RNF216 622..675 CDD:439000 14/69 (20%)
Rcat_RBR_RNF216 686..742 CDD:439014 16/58 (28%)

Return to query results.
Submit another query.