DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ari-2 and Ankib1

DIOPT Version :9

Sequence 1:NP_477374.1 Gene:ari-2 / 37542 FlyBaseID:FBgn0025186 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_006236111.1 Gene:Ankib1 / 368062 RGDID:1597088 Length:1091 Species:Rattus norvegicus


Alignment Length:530 Identity:146/530 - (27%)
Similarity:248/530 - (46%) Gaps:77/530 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DIEMDMESDNDGEYDDDYDYYNTGEDCDVERLDPKRADPEYFEYECLTVEDIEKLLNERVEKLNT 68
            |:.:.:||......|.:      .|:.:.|.....:.:|    ||.|..:|:.:|.:..:.:...
  Rat   193 DLALSLESQMVFSRDPE------AEEIEAEYAALDKREP----YEGLRPQDLRRLKDMLIVETAD 247

  Fly    69 ILQITPSLAKVLLLEHQWNNVAVVEKYRQDANALLVTARIK----PPS-VAVTDT-------AST 121
            :||.....|:.||..|.|:...::|.:..:.......:.::    ||| ....||       .:|
  Rat   248 MLQAPLFTAEALLRAHDWDREKLLEAWMSNPENCCQRSGVQMPAPPPSGCNAWDTLPSPRTPRTT 312

  Fly   122 SAAAASAQLLRLGSSGYKTTASATPQYRSQMCPVC-ASSQLGDKFYSLACGHSFCKDCWTIYFET 185
            .::..|...:.|......|:          :|.:| .|..:.:....:.|||.||:.||..:...
  Rat   313 RSSVTSPDEISLSPGDLDTS----------LCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNL 367

  Fly   186 QIFQGISTQIGCMAQMCNVRVPEDLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQII 250
            :|.:|.:..|.|.|..|...||.|::.::|::. |..:|.||..|.:|:::|.:::||...|:..
  Rat   368 KIQEGEAHNIFCPAYECFQLVPVDVIESVVSKE-MDKRYLQFDIKAFVENNPAIKWCPTAGCERA 431

  Fly   251 V----QSSEISAK--------RAICKACHTG--FCFRCGMDYHAPTDCQVIKKWLTKCA------ 295
            |    |.|..|..        ||....|..|  ||:.|..:.|.|.|||..|.||.|..      
  Rat   432 VRLTKQGSNPSGSDTLSFPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEE 496

  Fly   296 --------DDSETANYISAHTKDCPKCHICIEKNGGCNHMQCFNCKHDFCWMCLGDWKTHGSE-- 350
                    :|:....::..::|.|..|...|:||.|||||||..||:||||:||.:||.|.|.  
  Rat   497 LVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICLEEWKKHSSSTG 561

  Fly   351 -YYECSRYKDNPNIANES--VHVQAR------EALKKYLHYYERWENHSKSLKLEQQTIDRLRQR 406
             ||.|:||:...::..:|  :.|:|.      :.|.:::|||.|::||..|.:|||:.:...:::
  Rat   562 GYYRCTRYEVIQHVEEQSKEMTVEAEKKHKRFQELDRFMHYYTRYKNHEHSYQLEQRLLKTAKEK 626

  Fly   407 ---INSKVMNGSGTWIDWQYLFNAAALLAKCRYTLQYTYPYAYYMEAGS-RKNLFEYQQAQLEAE 467
               ::..:....|...|..::.:|..:|.|.|..|:.:|||.:::|..| :|.:||..|..||..
  Rat   627 MEQLSRALKETEGGCPDTTFIEDAVHVLLKTRRILKCSYPYGFFLEPKSTKKEIFELMQTDLEMV 691

  Fly   468 IENLSWKIER 477
            .|:|:.|:.|
  Rat   692 TEDLAQKVNR 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-2NP_477374.1 RING-HC_RBR_TRIAD1 151..204 CDD:319687 16/53 (30%)
IBR 222..284 CDD:214763 22/75 (29%)
Ankib1XP_006236111.1 ANK repeat 47..77 CDD:293786
Ank_2 50..176 CDD:403870
ANK repeat 79..143 CDD:293786
ANK repeat 145..176 CDD:293786
RING-HC_RBR_ANKIB1 333..389 CDD:319688 16/55 (29%)
IBR 403..476 CDD:396187 21/72 (29%)
IBR 502..553 CDD:396187 22/50 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D429758at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.