DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ari-2 and ari-1.3

DIOPT Version :9

Sequence 1:NP_477374.1 Gene:ari-2 / 37542 FlyBaseID:FBgn0025186 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001379539.1 Gene:ari-1.3 / 172282 WormBaseID:WBGene00016156 Length:491 Species:Caenorhabditis elegans


Alignment Length:519 Identity:176/519 - (33%)
Similarity:277/519 - (53%) Gaps:62/519 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSDIEMDMESDNDGEYDDDYDYYNTGEDCDVERLDPKRADPEYF-----EYECLTVEDIEKLLN 60
            |:||.|:.||.....|  ||.|.....:|..:.|.|...:|  |.     :.|.|..:.:|..:.
 Worm     1 MNSDDEIYMEGSASSE--DDMDDECLSDDDGIARHDQSASD--YLNKKDKDNEVLDHDSLEAEMK 61

  Fly    61 ERVEKLNTILQITPSLAKVLLLEHQWNNVAVVEKYRQ--DANALLVTARIKPPSVAVTDTASTSA 123
            :.:.::..:||:...:.::||.:::||..:::|::.:  |..|.|:.|::.|....|       .
 Worm    62 KAISEVEAVLQVKTGVCRILLHKYKWNKESLLERFYEHPDTIAFLIDAQVIPRQQEV-------I 119

  Fly   124 AAASAQLLRLGSSGYKTTASATPQYRSQMCPVCASSQLGDKFYSLACGHSFCKDCWTIYFETQIF 188
            .|..|:                       |.:|.|.   |:...|:|.|..|.:||..|...:|.
 Worm   120 PAGDAE-----------------------CDICCSM---DELSGLSCNHRACAECWQAYLTNKIV 158

  Fly   189 QGISTQIGCMAQMCNVRVPEDLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQIIVQS 253
            ....::|.|||..|.:.:.::.||:.::.|.|..||::.....||:.:..||:|||.:|...|:.
 Worm   159 SDAQSEIECMAPNCKLLIEDEKVLSYISDPTMVSKYRKLMVASYVEINCLLRWCPGIDCGKAVKV 223

  Fly   254 SEISAKRAICKACHTGFCFRCGMDYHAPTDCQVIKKWLTKCADDSETANYISAHTKDCPKCHICI 318
            |....:..:| :|.|.|||.||.::|.|.:|:.:|||:.||.|||||.|:|:|:|||||||.|.|
 Worm   224 SHWEPRLVVC-SCGTCFCFSCGQNWHEPLNCRHLKKWIKKCQDDSETMNWINANTKDCPKCMIPI 287

  Fly   319 EKNGGCNHMQCFN--CKHDFCWMCLGDWKTHGSEYYECSRYKD----NPNIANESVHVQAREALK 377
            |||||||.|.|.|  |:::||||||..|..||.: |.|:.|.:    ||..|.|.    :|..||
 Worm   288 EKNGGCNRMLCTNSGCRYEFCWMCLEPWTKHGYQ-YACNGYDETAVKNPQDAQEI----SRANLK 347

  Fly   378 KYLHYYERWENHSKSLKLEQQTIDRLRQRINSKVMNGSGTWIDWQYLFNAAALLAKCRYTLQYTY 442
            :||.|:.|:..|.:||:||.:...::.::: .::.|.|.:||:.|:|..|..:|::||.||.|||
 Worm   348 RYLFYFNRYMGHEQSLQLEGKLNIKVAKKM-EQMENMSMSWIEVQFLRKAVDILSECRRTLMYTY 411

  Fly   443 PYAYYMEAGSRKNLFEYQQAQLEAEIENLSWKIER-AETTDLGDLENQMD----IAEKRRTTLL 501
            .:|:|::..:...:||..||.||.|.|.||..:|| .|..||..|:.::.    ..|:||..||
 Worm   412 AFAFYLKKDNNSIIFESNQANLEMETEQLSGFLERDLEDEDLVTLKQKVQDKYRYVEQRRKVLL 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-2NP_477374.1 RING-HC_RBR_TRIAD1 151..204 CDD:319687 17/52 (33%)
IBR 222..284 CDD:214763 22/61 (36%)
ari-1.3NP_001379539.1 RING_Ubox 125..178 CDD:418438 17/78 (22%)
RING-HC finger (C3HC4-type) 126..172 CDD:319361 16/48 (33%)
IBR 193..253 CDD:214763 22/60 (37%)
IBR <274..315 CDD:396187 27/40 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54219
OrthoDB 1 1.010 - - D429758at33208
OrthoFinder 1 1.000 - - FOG0000379
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X447
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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