DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11291 and Lhpp

DIOPT Version :10

Sequence 1:NP_611656.2 Gene:CG11291 / 37541 FlyBaseID:FBgn0034713 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001009706.1 Gene:Lhpp / 361663 RGDID:1359187 Length:270 Species:Rattus norvegicus


Alignment Length:295 Identity:65/295 - (22%)
Similarity:123/295 - (41%) Gaps:53/295 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AEWLAGIDTIICSTDGVLWQENT----PIEGSVEAFNAIISKGKRCLIATNECCLTNKDLFQKAK 78
            ||.|:|:..::....|||:...|    .|.|||||...:.....:....|||...:.::|....:
  Rat     5 AERLSGVRGVLLDISGVLYDSGTGGGAAIAGSVEAVARLKRSPLKVRFCTNESQKSRRELVGVLQ 69

  Fly    79 CLGFNVKEQDIFSSSGAIASYLSDRKFKKKILVLGGDGIRKDLKEAGFCSVVNDLQPNDQKKIDF 143
            .|||::.|.::.:.:.|....|.:|..:..:|:  .:|:|.:..:      ::...||       
  Rat    70 RLGFDISEGEVTAPAPATCQILKERGLRPHLLI--HEGVRSEFDD------IDMSNPN------- 119

  Fly   144 VRSLVLDPDVGAVLVARDDNMIANELLVACNYLQNPKVLFLTTCIDGFQPFGKKR--------IP 200
               .|:..|.|.....::.|.....|:    .|:||.::.|          ||.|        :.
  Rat   120 ---CVVIADAGEGFSYQNMNRAFQVLM----ELENPVLISL----------GKGRYYKETSGLML 167

  Fly   201 DAGSLASAIEIIVQRKPIVLGKPNQRILGKLMKSGEIKPEKTLVIGNSLKSDILFASICGFQSLL 265
            |.|....|:|.....:..|:|||:.......:::..::..:.::||:.:..|:..|..||.::|.
  Rat   168 DVGGYMKALEYACGIEAEVVGKPSPEFFRSALQAIGVEAHQAIMIGDDIVGDVGGAQQCGMRALQ 232

  Fly   266 VGCDNGAIEKAEKIKKEGDEKKMKLVPDAFLSGLA 300
            |        :..|. :.|||...::..|.::..||
  Rat   233 V--------RTGKF-RPGDEHHPEVRADGYVDNLA 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11291NP_611656.2 HAD_PNPase_UmpH-like 19..302 CDD:319834 64/294 (22%)
LhppNP_001009706.1 HAD-SF-IIA-hyp3 11..267 CDD:162372 61/289 (21%)

Return to query results.
Submit another query.