DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp8 and Alp6

DIOPT Version :9

Sequence 1:NP_001286709.1 Gene:Alp8 / 37540 FlyBaseID:FBgn0034712 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_610496.1 Gene:Alp6 / 35981 FlyBaseID:FBgn0033423 Length:515 Species:Drosophila melanogaster


Alignment Length:532 Identity:212/532 - (39%)
Similarity:304/532 - (57%) Gaps:34/532 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RQLVLPILLLLALAGTALCGVQEVHNVLELTGQAANKLKFSTDVATEKYTPPEEMDPQYWYNIAD 70
            |:.:|.::|.:.|:|:|             :||..:....|.|..:......||...|||.:.|.
  Fly     3 RRFILLLVLAVCLSGSA-------------SGQRDHPRGRSFDAESHPIKYAEEQQTQYWVDKAQ 54

  Fly    71 EEITKRL-QLPQPNSQKAKNIIMFLGDGMPLSTVAAARILKGQRQGNTGEESSLSFERFPYTGLS 134
            .::..:| :.....:.||||:|:||||||.:.||.|.|.|    .|::.|:  :.||.|||||||
  Fly    55 AKLLSKLAEQESATTNKAKNVILFLGDGMSVHTVTATRNL----LGDSAEQ--VYFEGFPYTGLS 113

  Fly   135 RTYCSNAQVPDSACTATAYLCGVKTNIVNIGVSAAVEYNNCTASQDPANRLTSIAEWAQNAGKST 199
            :|||.|.||.||||||||||.|||.|...|||:|.|...:|..:.:..:|:.|||.|||.|||..
  Fly   114 KTYCVNRQVADSACTATAYLGGVKANYGTIGVNANVSRYSCDGAANEEDRVLSIAHWAQAAGKDA 178

  Fly   200 GIVTTTTLTHASPSGAYAKTANRMWECDTDVTSYGVDANSCIDMATQLVTQTPGKNFEVMFGGGM 264
            |:|||..:|||||:|.||..|:|.||.|.:|.:...|....||:|.|||.|..|:..:|:.|||.
  Fly   179 GLVTTARVTHASPAGVYAHIADRNWENDWEVANRECDPEQTIDIARQLVEQPVGQQLKVILGGGR 243

  Fly   265 GKFLPNSIVDSHGNPGERSDGVNLLSRW----QGLHDGGVLVTNRNQLLKLNVSAVSSVIGLFQS 325
            ..|:..::.|..|.||:|:||.:|:..|    :..:.....|.:|..|..:::.....::|||.:
  Fly   244 KNFIDATVNDEEGYPGKRTDGRHLIRSWLDQKKEANVSAKYVWSRKGLSLVDLENTDYLLGLFAN 308

  Fly   326 KLMNFHLEAD----DTYQPTLSELTEVTIKKLSQNKEHGYFAFIEGGLIDYGNHYTKAGYALDEA 386
            ..:.::.:.|    ....|:||||||..|..||:| :.|:|.|:||..||..:|.|.|..:|::.
  Fly   309 DHLPYNGDRDRKRSQLADPSLSELTEAAITVLSRN-DKGFFLFVEGARIDMAHHDTFAKRSLEDT 372

  Fly   387 LEFEKAIQLARDMTDIEDTLIVVTADHGHAVSIAGYPGRGTPILGINQHDTDINGVQYSVLNYAA 451
            .||.:|:|.||::|..:||||||||||.|.:||.|||.|...|.|:.|...|  .:.|::|:||.
  Fly   373 AEFARAVQKARELTSEDDTLIVVTADHAHVMSINGYPYRDQEITGLAQLADD--NLPYTILSYAN 435

  Fly   452 GPNQYLDEN---GQRIPLDDILGSDDAITPSYIPKDQGVHSGEDVGIFASGPQSHLFTGVMQQST 513
            ||..|...|   |:.:..:.::...|...|:..|.|...|.|:||.::||||.:..|:|..:||.
  Fly   436 GPGYYSGYNRAEGRALLKEKLVADSDYQYPTLAPLDAETHGGDDVAVYASGPYAQYFSGNYEQSN 500

  Fly   514 IPHLMAYAACIG 525
            ||.|||.||.||
  Fly   501 IPALMARAAGIG 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp8NP_001286709.1 ALP_like 88..525 CDD:304875 191/447 (43%)
Alp6NP_610496.1 ALP_like 72..511 CDD:304875 192/447 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466661
Domainoid 1 1.000 363 1.000 Domainoid score I896
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I224
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - otm51319
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
109.900

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