DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp2 and Alp13

DIOPT Version :9

Sequence 1:NP_611654.1 Gene:Alp2 / 37539 FlyBaseID:FBgn0283480 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_649978.2 Gene:Alp13 / 41236 FlyBaseID:FBgn0037786 Length:479 Species:Drosophila melanogaster


Alignment Length:540 Identity:125/540 - (23%)
Similarity:221/540 - (40%) Gaps:124/540 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CLYPIFLFLLAFVG--TALGRVQEVHNVLELTGQKASKLRFSTDVATGKYTPPEEMDPQFWYKLA 70
            ||..:.:.||. :|  |......:|.||.::...|       ..|||.:         :.||...
  Fly    28 CLITVMVTLLC-IGFMTRYEVENDVANVADVDYWK-------DKVATSQ---------KIWYDKG 75

  Fly    71 DEEIAKRLQLPQPNSDRAKNVIMFLGDGMPISTVTAARI-LKGQRQGNTGEESSLSFEKFPYSGL 134
            .:|:.:.|: || :....|||.:|:..|:......|.|. .....:|||    :..:::||:...
  Fly    76 IDELNEALR-PQ-DLTYPKNVRIFVIQGIDGRDWAAFRFPTSDASRGNT----NFIWDRFPHLAR 134

  Fly   135 SRTYCANAQVPDSACTATAYLCGVKTNIINIGVSAAVNFNNC----TASQDPANRLTSIAEWAQN 195
            .:..|:.......|..:.|...|:..:      ....|..:|    .|:|.|    .||...||.
  Fly   135 LKNSCSQQFPCQVASVSRALWLGIPLD------KVPDNQQDCGRLFNATQGP----ISILRQAQL 189

  Fly   196 AGKSTGFVTTTTLTHASPSGAYAKTANRMWQSDTDVTSYGVDASTCVDMATQLVTQTPGKNFEVM 260
            ||..||||||..:|  .|:||....||..::.|..:....: .|.|.|:|.||::...||...|:
  Fly   190 AGLRTGFVTTQRIT--GPTGAALGNANGNFECDESMPLNSI-KSGCQDIAQQLISDETGKFLNVL 251

  Fly   261 FGGG---MGKFLPKTTKDSHGKYG-------ERSDGVNLLSRW--QGLHDKGV------LVTNRK 307
            .|||   :...:|.|      ||.       |.:||.|||..|  |.|.:..:      |:..|.
  Fly   252 IGGGRQMLSSLVPNT------KYDPVDEMLCESNDGRNLLKDWRNQKLKESKINRIIFDLIQRRD 310

  Fly   308 QLLNLDVSAASSIIGTFQSGLMDFHMDADPTYQPTLSELTEVAIKKLSHNENGYFVFIEGGLIDY 372
            :|.:|:.|:...::|...:|.:..:..|     |:|..:.:.::..|:..:.||.:.:|      
  Fly   311 ELESLNSSSFDYLMGVMANGDLSGNSKA-----PSLKLMVDKSLNVLTKYKQGYLLIVE------ 364

  Fly   373 GNHYTQAGYALDEALEF--EKAIQLAREMTNISDTLIVVTADHGHAVSIAGYPGRGTPILGLNQH 435
              .:..:|....|.|:.  :..:.|.::...:  ||:::|    :|:    ||   .|.|.::: 
  Fly   365 --QFIPSGIDKREQLQLLNDTLVNLHKDQDTL--TLVLMT----NAI----YP---KPSLDVSE- 413

  Fly   436 DTDINGVKYSVLNYAAGPNQYLDEHGQRIPLDDILGPDDAISPSYIDKEIGVHSGEDVGIWASGP 500
            :|:...:...:.|.|                           .|.|.|.:.....|.: ::|.||
  Fly   414 ETETISLLPEIFNEA---------------------------ESEIQKRLHQMPSESL-LFAQGP 450

  Fly   501 QSHLFTGVMQQSTIPHLMAY 520
            :|.:|.||.:::.:.|.:::
  Fly   451 KSSIFQGVRKETFLAHAISH 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp2NP_611654.1 ALP_like 89..525 CDD:304875 106/457 (23%)
Alp13NP_649978.2 ALP_like 127..472 CDD:304875 96/418 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466690
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.