DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp2 and Alp6

DIOPT Version :9

Sequence 1:NP_611654.1 Gene:Alp2 / 37539 FlyBaseID:FBgn0283480 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_610496.1 Gene:Alp6 / 35981 FlyBaseID:FBgn0033423 Length:515 Species:Drosophila melanogaster


Alignment Length:511 Identity:208/511 - (40%)
Similarity:291/511 - (56%) Gaps:40/511 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TGQKASKLRFSTDVATGKYTPPEEMDPQFWY---------KLADEEIAKRLQLPQPNSDRAKNVI 92
            :||:......|.|..:......||...|:|.         |||::|.|        .:::|||||
  Fly    20 SGQRDHPRGRSFDAESHPIKYAEEQQTQYWVDKAQAKLLSKLAEQESA--------TTNKAKNVI 76

  Fly    93 MFLGDGMPISTVTAARILKGQRQGNTGEESSLSFEKFPYSGLSRTYCANAQVPDSACTATAYLCG 157
            :||||||.:.||||.|.|    .|::.|:  :.||.|||:|||:|||.|.||.||||||||||.|
  Fly    77 LFLGDGMSVHTVTATRNL----LGDSAEQ--VYFEGFPYTGLSKTYCVNRQVADSACTATAYLGG 135

  Fly   158 VKTNIINIGVSAAVNFNNCTASQDPANRLTSIAEWAQNAGKSTGFVTTTTLTHASPSGAYAKTAN 222
            ||.|...|||:|.|:..:|..:.:..:|:.|||.|||.|||..|.|||..:|||||:|.||..|:
  Fly   136 VKANYGTIGVNANVSRYSCDGAANEEDRVLSIAHWAQAAGKDAGLVTTARVTHASPAGVYAHIAD 200

  Fly   223 RMWQSDTDVTSYGVDASTCVDMATQLVTQTPGKNFEVMFGGGMGKFLPKTTKDSHGKYGERSDGV 287
            |.|::|.:|.:...|....:|:|.|||.|..|:..:|:.|||...|:..|..|..|..|:|:||.
  Fly   201 RNWENDWEVANRECDPEQTIDIARQLVEQPVGQQLKVILGGGRKNFIDATVNDEEGYPGKRTDGR 265

  Fly   288 NLLSRWQGLHDK------GVLVTNRKQLLNLDVSAASSIIGTFQSGLMDFHMDAD----PTYQPT 342
            :|:..|  |..|      ...|.:||.|..:|:.....::|.|.:..:.::.|.|    ....|:
  Fly   266 HLIRSW--LDQKKEANVSAKYVWSRKGLSLVDLENTDYLLGLFANDHLPYNGDRDRKRSQLADPS 328

  Fly   343 LSELTEVAIKKLSHNENGYFVFIEGGLIDYGNHYTQAGYALDEALEFEKAIQLAREMTNISDTLI 407
            ||||||.||..||.|:.|:|:|:||..||..:|.|.|..:|::..||.:|:|.|||:|:..||||
  Fly   329 LSELTEAAITVLSRNDKGFFLFVEGARIDMAHHDTFAKRSLEDTAEFARAVQKARELTSEDDTLI 393

  Fly   408 VVTADHGHAVSIAGYPGRGTPILGLNQHDTDINGVKYSVLNYAAGPNQYLD---EHGQRIPLDDI 469
            ||||||.|.:||.|||.|...|.||.|...|  .:.|::|:||.||..|..   ..|:.:..:.:
  Fly   394 VVTADHAHVMSINGYPYRDQEITGLAQLADD--NLPYTILSYANGPGYYSGYNRAEGRALLKEKL 456

  Fly   470 LGPDDAISPSYIDKEIGVHSGEDVGIWASGPQSHLFTGVMQQSTIPHLMAYASCVG 525
            :...|...|:....:...|.|:||.::||||.:..|:|..:||.||.|||.|:.:|
  Fly   457 VADSDYQYPTLAPLDAETHGGDDVAVYASGPYAQYFSGNYEQSNIPALMARAAGIG 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp2NP_611654.1 ALP_like 89..525 CDD:304875 193/448 (43%)
Alp6NP_610496.1 ALP_like 72..511 CDD:304875 194/448 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466655
Domainoid 1 1.000 363 1.000 Domainoid score I896
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I224
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - otm51319
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
109.900

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