DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and AT1G29080

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_564320.1 Gene:AT1G29080 / 839783 AraportID:AT1G29080 Length:346 Species:Arabidopsis thaliana


Alignment Length:317 Identity:95/317 - (29%)
Similarity:132/317 - (41%) Gaps:83/317 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 NSIHRLGWSARKYDQWWGRKYSEGLKLRLGTKEPTYRVKAMTRLKNPTDGLPSSFNALDK----W 197
            |..::||  ..::..|              |||.........|..|.|    |.|..:::    |
plant    78 NQSYKLG--VNEFTDW--------------TKEEFLATYTGLRGVNVT----SPFEVVNETKPAW 122

  Fly   198 SSYISE----------------VPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQLSAQNILSC 246
            :..:|:                |..||.||..|..|..:.......| ::| ..:.||.|.:|.|
plant   123 NWTVSDVLGTNKDWRNEGAVTPVKSQGECGGCWAFSAIAAVEGLTKI-ARG-NLISLSEQQLLDC 185

  Fly   247 TRRQ-QGCEGGHLDAAWRYLHK-KGVVDENCYPYTQHRDTCKIRHNSR-SLRANGCQK-PVNVDR 307
            ||.| .||:||....|:.|:.| :|:..||.|||......|  |.|:| ::...|.:. |.|.:|
plant   186 TREQNNGCKGGTFVNAFNYIIKHRGISSENEYPYQVKEGPC--RSNARPAILIRGFENVPSNNER 248

  Fly   308 DSLYTVGPAYSLNREADIMAEIFHSGPVQATMRVNR-DFFAYSGGVYRE----TAANRKAPTGFH 367
            ..|..|      :|:           ||...:..:. .|..||||||..    |:.|       |
plant   249 ALLEAV------SRQ-----------PVAVAIDASEAGFVHYSGGVYNARNCGTSVN-------H 289

  Fly   368 SVKLVGWGEEHNGEKYWIAANSWGSWWGEHGYFRILRG----SNECGIEEYVLASWP 420
            :|.|||:|....|.|||:|.||||..|||:||.||.|.    ...||:.:|  ||:|
plant   290 AVTLVGYGTSPEGMKYWLAKNSWGKTWGENGYIRIRRDVEWPQGMCGVAQY--ASYP 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 82/261 (31%)
AT1G29080NP_564320.1 Inhibitor_I29 39..95 CDD:214853 6/32 (19%)
Peptidase_C1 135..345 CDD:425470 81/240 (34%)
Blue background indicates that the domain is not in the aligned region.

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