DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and XCP2

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_564126.1 Gene:XCP2 / 838677 AraportID:AT1G20850 Length:356 Species:Arabidopsis thaliana


Alignment Length:298 Identity:86/298 - (28%)
Similarity:124/298 - (41%) Gaps:65/298 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 GRKYSEGL------------KLRLGTK--------EPTYRVKAMTRLKNPTDGLPSSFNALDKWS 198
            |:.|..||            |:.||.|        |.:|...|.    ...:.:|.|.:...|.:
plant    89 GKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAY----RDVEAVPKSVDWRKKGA 149

  Fly   199 SYISEVPDQGWCGASWVLSTTSVASDRFAIQSKGK----ENVQLSAQNILSC-TRRQQGCEGGHL 258
              ::||.:||.||:.|..||.:      |::...|    ....||.|.::.| |....||.||.:
plant   150 --VAEVKNQGSCGSCWAFSTVA------AVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLM 206

  Fly   259 DAAWRYLHKK-GVVDENCYPYTQHRDTCKI-RHNSRSLRANGCQKPVNVDRDSLYTVGPAYSLNR 321
            |.|:.|:.|. |:..|..|||:....||:: :..|.::..||.|.               ...|.
plant   207 DYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQD---------------VPTND 256

  Fly   322 EADIMAEIFHSGPVQATMRVNRDFFAYSGGVYRETAANRKAPTGFHSVKLVGWGEEHNGEKYWIA 386
            |..::..:.|.....|.....|:|..|||||:    ..|......|.|..||:|.. .|..|.|.
plant   257 EKSLLKALAHQPLSVAIDASGREFQFYSGGVF----DGRCGVDLDHGVAAVGYGSS-KGSDYIIV 316

  Fly   387 ANSWGSWWGEHGYFRILRGSNE----CGIEEYVLASWP 420
            .||||..|||.||.|:.|.:.:    |||.:  :||:|
plant   317 KNSWGPKWGEKGYIRLKRNTGKPEGLCGINK--MASFP 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 72/239 (30%)
XCP2NP_564126.1 Inhibitor_I29 51..106 CDD:214853 4/16 (25%)
Peptidase_C1 138..353 CDD:425470 75/245 (31%)
Blue background indicates that the domain is not in the aligned region.

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