DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and AT3G49340

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_566920.1 Gene:AT3G49340 / 824096 AraportID:AT3G49340 Length:341 Species:Arabidopsis thaliana


Alignment Length:339 Identity:85/339 - (25%)
Similarity:132/339 - (38%) Gaps:93/339 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 SARKYDQW---WGRKYSE-------------GLK----LRLGTKEPTYRV--------------- 174
            :..|::||   :.|.||:             .||    :.:.|.: ||.:               
plant    31 AVEKHEQWMSRFNRVYSDDSEKTSRFEIFTNNLKFVESINMNTNK-TYTLDVNEFSDLTDEEFKA 94

  Fly   175 --------KAMTRLKNPTDGLPSSF---------NALDKW--SSYISEVPDQGWCGASWVLSTTS 220
                    :.|||:.........||         .::| |  ...::.|..|..||..|..|..:
plant    95 RYTGLVVPEGMTRISTTDSHETVSFRYENVGETGESMD-WIQEGAVTSVKHQQQCGCCWAFSAVA 158

  Fly   221 VASDRFAIQSKGK----ENVQLSAQNILSCTRRQQGCEGGHLDAAWRYL-HKKGVVDENCYPYTQ 280
                  |::...|    |.|.||.|.:|.|:....||.||.:..|:.|: ..:|:..|:.|||..
plant   159 ------AVEGMTKIANGELVSLSEQQLLDCSTENNGCGGGIMWKAFDYIKENQGITTEDNYPYQG 217

  Fly   281 HRDTCKIRHNSRSLRANGCQKPVNVDRDSLYTVGPAYSLNREADIMAEIFHSGPVQATMRVNRDF 345
            .:.||:..|.:.:..:.....|.|.:...|..|.       :..:...|..||         .:|
plant   218 AQQTCESNHLAAATISGYETVPQNDEEALLKAVS-------QQPVSVAIEGSG---------YEF 266

  Fly   346 FAYSGGVYRETAANRKAPTGFHSVKLVGWGEEHNGEKYWIAANSWGSWWGEHGYFRILRGSNE-- 408
            ..||||::......:..    |:|.:||:|....|.|||:..||||..|||:||.||:|..:.  
plant   267 IHYSGGIFNGECGTQLT----HAVTIVGYGVSEEGIKYWLLKNSWGESWGENGYMRIMRDVDSPQ 327

  Fly   409 --CGIEEYVLASWP 420
              ||:..  ||.:|
plant   328 GMCGLAS--LAYYP 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 68/248 (27%)
AT3G49340NP_566920.1 Inhibitor_I29 35..92 CDD:462410 10/57 (18%)
Peptidase_C1 129..340 CDD:425470 69/240 (29%)
Blue background indicates that the domain is not in the aligned region.

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