DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and AT3G45310

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_566880.1 Gene:AT3G45310 / 823669 AraportID:AT3G45310 Length:358 Species:Arabidopsis thaliana


Alignment Length:338 Identity:97/338 - (28%)
Similarity:140/338 - (41%) Gaps:67/338 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 DDAIVHSV-NSIHRLGWSARKYDQWWGRKYS--EGLKLRLGT-KEPTYRVKAMTR--------LK 181
            :|.:|..: .|.|.|.:|  ::...:|:||.  |.:|||... ||....:::..:        |.
plant    43 EDTVVQILGQSRHVLSFS--RFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLN 105

  Fly   182 NPTD-----------GLPSSFNALDKWSSYISE--VPD---------------QGWCGASWVLST 218
            ...|           |...:.:|..|.|..|:|  |||               ||.||:.|..||
plant   106 QFADLTWQEFQRYKLGAAQNCSATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFST 170

  Fly   219 TSVASDRFAIQSKGKENVQLSAQNILSC--TRRQQGCEGGHLDAAWRYLHKKGVVD-ENCYPYTQ 280
            |......:. |:.|| .:.||.|.::.|  |....||.||....|:.|:...|.:| |..||||.
plant   171 TGALEAAYH-QAFGK-GISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTG 233

  Fly   281 HRDTCKIRHNSRSLRANGCQKPVNVDRDSL-YTVGPAYSLNREADIMAEIFHSGPVQATMRVNRD 344
            ....||.     |.:..|.|.     |||: .|:|....|.....::.      ||.....|..:
plant   234 KDGGCKF-----SAKNIGVQV-----RDSVNITLGAEDELKHAVGLVR------PVSVAFEVVHE 282

  Fly   345 FFAYSGGVYRETAANRKAPTGFHSVKLVGWGEEHNGEKYWIAANSWGSWWGEHGYFRILRGSNEC 409
            |..|..||:.............|:|..||:|.| :...||:..||||..||::|||::..|.|.|
plant   283 FRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVE-DDVPYWLIKNSWGGEWGDNGYFKMEMGKNMC 346

  Fly   410 GIEEYVLASWPYV 422
            |:.  ..:|:|.|
plant   347 GVA--TCSSYPVV 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 76/249 (31%)
AT3G45310NP_566880.1 Inhibitor_I29 59..115 CDD:462410 12/57 (21%)
Peptidase_C1 141..356 CDD:425470 72/235 (31%)
Blue background indicates that the domain is not in the aligned region.

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