DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and AT3G19400

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_566634.2 Gene:AT3G19400 / 821474 AraportID:AT3G19400 Length:362 Species:Arabidopsis thaliana


Alignment Length:345 Identity:86/345 - (24%)
Similarity:132/345 - (38%) Gaps:104/345 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 YDQWW--GRKYSEGLKLRLGTKEPTYRV------------------------------------- 174
            |:||.  .||...|    ||.||..:::                                     
plant    44 YEQWLVENRKNYNG----LGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAI 104

  Fly   175 ---KAMTRLKNPT----------DGLPSSFNALDKW--SSYISEVPDQGWCGASWVLSTTSVASD 224
               |.|.|.|:..          |.||...:    |  :..:..|.|||.||:.|..|  :|.:.
plant   105 YLRKKMERTKDSVKTERYLYKEGDVLPDEVD----WRANGAVVSVKDQGNCGSCWAFS--AVGAV 163

  Fly   225 RFAIQSKGKENVQLSAQNILSCTRR--QQGCEGGHLDAAWRYLHKKGVVD-ENCYPYTQH-RDTC 285
            ....|....|.:.||.|.::.|.|.  ..||:||.::.|:.::.|.|.:: :..|||..: ...|
plant   164 EGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLC 228

  Fly   286 KI--RHNSRSLRANGCQKPVNVDRDSLYTVGPAYSLNREADIMAEIFHSGPVQATMRVNRDFF-A 347
            ..  .:|:|.:..:|.:   :|.||.            |..:...:.|. ||...:..:...| .
plant   229 NADKNNNTRVVTIDGYE---DVPRDD------------EKSLKKAVAHQ-PVSVAIEASSQAFQL 277

  Fly   348 YSGGVYRETAANRKAPTGF---HSVKLVGWGEEHNGEKYWIAANSWGSWWGEHGYFRILRGSNE- 408
            |..||...|.       |.   |.|.:||:|.. :||.|||..||||..||:.||.::.|..:: 
plant   278 YKSGVMTGTC-------GISLDHGVVVVGYGST-SGEDYWIIRNSWGLNWGDSGYVKLQRNIDDP 334

  Fly   409 ---CGIEEYVLASWPYVYSY 425
               |||.  ::.|:|...|:
plant   335 FGKCGIA--MMPSYPTKSSF 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 67/244 (27%)
AT3G19400NP_566634.2 Inhibitor_I29 44..100 CDD:214853 10/59 (17%)
Peptidase_C1 130..348 CDD:425470 69/249 (28%)
Blue background indicates that the domain is not in the aligned region.

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